fast.genomicscompare 6,575 genera of bacteria & archaea

 

JANLFV01 sp024653345 A05DMB20

Genome identifier: GCA_024653345.1

NCBI assembly name: ASM2465334v1

GTDB taxonomy: Bacteria, Bipolaricaulota, Bipolaricaulia, RBG-16-55-9, JANLFV01, JANLFV01, JANLFV01 sp024653345

NCBI taxonomy: Bacteria, Candidatus Bipolaricaulota

Scaffolds: 31

Genes: 1,710 Protein-coding: 1,618 RNAs: 57 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANLFV010000001.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_1_length_335341_cov_10.702743, whole genome shotgun sequence 335,341
JANLFV010000002.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_2_length_211880_cov_10.259426, whole genome shotgun sequence 211,880
JANLFV010000003.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_3_length_180645_cov_10.567396, whole genome shotgun sequence 180,645
JANLFV010000004.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_4_length_141758_cov_10.129778, whole genome shotgun sequence 141,758
JANLFV010000005.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_5_length_140950_cov_10.786238, whole genome shotgun sequence 140,950
JANLFV010000006.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_6_length_81060_cov_10.648355, whole genome shotgun sequence 81,060
JANLFV010000007.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_7_length_80577_cov_10.847830, whole genome shotgun sequence 80,577
JANLFV010000008.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_8_length_67808_cov_10.781338, whole genome shotgun sequence 67,808
JANLFV010000009.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_9_length_58065_cov_10.098604, whole genome shotgun sequence 58,065
JANLFV010000010.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_10_length_49770_cov_8.806316, whole genome shotgun sequence 49,770
JANLFV010000011.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_11_length_48766_cov_10.539303, whole genome shotgun sequence 48,766
JANLFV010000012.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_12_length_46992_cov_10.597567, whole genome shotgun sequence 46,992
JANLFV010000013.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_13_length_44633_cov_10.256920, whole genome shotgun sequence 44,633
JANLFV010000014.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_14_length_40925_cov_10.267923, whole genome shotgun sequence 40,925
JANLFV010000015.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_15_length_32270_cov_10.440074, whole genome shotgun sequence 32,270
JANLFV010000016.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_16_length_29128_cov_9.987205, whole genome shotgun sequence 29,128
JANLFV010000017.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_17_length_27626_cov_10.121976, whole genome shotgun sequence 27,626
JANLFV010000018.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_18_length_26271_cov_10.889919, whole genome shotgun sequence 26,271
JANLFV010000019.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_19_length_13262_cov_10.828803, whole genome shotgun sequence 13,262
JANLFV010000020.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_20_length_12303_cov_9.793517, whole genome shotgun sequence 12,303
JANLFV010000021.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_21_length_11138_cov_10.597853, whole genome shotgun sequence 11,138
JANLFV010000022.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_22_length_11051_cov_9.940524, whole genome shotgun sequence 11,051
JANLFV010000023.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_23_length_10260_cov_10.596668, whole genome shotgun sequence 10,260
JANLFV010000024.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_24_length_3606_cov_10.373416, whole genome shotgun sequence 3,606
JANLFV010000025.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_25_length_1091_cov_48.674710, whole genome shotgun sequence 1,091
JANLFV010000026.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_26_length_817_cov_8.450131, whole genome shotgun sequence 817
JANLFV010000027.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_27_length_724_cov_4.116592, whole genome shotgun sequence 724
JANLFV010000028.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_28_length_575_cov_47.788462, whole genome shotgun sequence 575
JANLFV010000029.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_29_length_551_cov_3.381048, whole genome shotgun sequence 551
JANLFV010000030.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_30_length_544_cov_1.687117, whole genome shotgun sequence 544
JANLFV010000031.1 MAG: Candidatus Acetothermia bacterium isolate A05DMB20 NODE_31_length_528_cov_8.300211, whole genome shotgun sequence 528

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory