fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA4181 sp017523725 RUI336

Genome identifier: GCA_024699385.1

NCBI assembly name: ASM2469938v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, UBA4181, UBA4181, UBA4181 sp017523725

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales

Scaffolds: 39

Genes: 1,980 Protein-coding: 1,915 RNAs: 52 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAILPQ010000001.1 MAG: Bacteroidales bacterium isolate RUI336 k141_10503524_flag=0_multi=11.9989_len=104876, whole genome shotgun sequence 104,876
JAILPQ010000002.1 MAG: Bacteroidales bacterium isolate RUI336 k141_10526784_flag=0_multi=12.0472_len=220688, whole genome shotgun sequence 220,688
JAILPQ010000003.1 MAG: Bacteroidales bacterium isolate RUI336 k141_2240584_flag=0_multi=15.9917_len=18113, whole genome shotgun sequence 18,113
JAILPQ010000004.1 MAG: Bacteroidales bacterium isolate RUI336 k141_1161675_flag=0_multi=10.9933_len=15055, whole genome shotgun sequence 15,055
JAILPQ010000005.1 MAG: Bacteroidales bacterium isolate RUI336 k141_10557645_flag=1_multi=11.0000_len=69322, whole genome shotgun sequence 69,322
JAILPQ010000006.1 MAG: Bacteroidales bacterium isolate RUI336 k141_2263653_flag=0_multi=11.9989_len=100376, whole genome shotgun sequence 100,376
JAILPQ010000007.1 MAG: Bacteroidales bacterium isolate RUI336 k141_13891573_flag=1_multi=12.9991_len=129456, whole genome shotgun sequence 129,456
JAILPQ010000008.1 MAG: Bacteroidales bacterium isolate RUI336 k141_10614513_flag=1_multi=7.0000_len=3101, whole genome shotgun sequence 3,101
JAILPQ010000009.1 MAG: Bacteroidales bacterium isolate RUI336 k141_650169_flag=0_multi=11.9888_len=9992, whole genome shotgun sequence 9,992
JAILPQ010000010.1 MAG: Bacteroidales bacterium isolate RUI336 k141_6764705_flag=0_multi=12.9904_len=25266, whole genome shotgun sequence 25,266
JAILPQ010000011.1 MAG: Bacteroidales bacterium isolate RUI336 k141_6765979_flag=0_multi=11.9968_len=34324, whole genome shotgun sequence 34,324
JAILPQ010000012.1 MAG: Bacteroidales bacterium isolate RUI336 k141_3444019_flag=1_multi=13.0000_len=146757, whole genome shotgun sequence 146,757
JAILPQ010000013.1 MAG: Bacteroidales bacterium isolate RUI336 k141_2896412_flag=0_multi=117.0000_len=44486, whole genome shotgun sequence 44,486
JAILPQ010000014.1 MAG: Bacteroidales bacterium isolate RUI336 k141_7848487_flag=1_multi=14.9849_len=9383, whole genome shotgun sequence 9,383
JAILPQ010000015.1 MAG: Bacteroidales bacterium isolate RUI336 k141_8960505_flag=1_multi=12.9996_len=208189, whole genome shotgun sequence 208,189
JAILPQ010000016.1 MAG: Bacteroidales bacterium isolate RUI336 k141_7875038_flag=0_multi=17.3240_len=207571, whole genome shotgun sequence 207,571
JAILPQ010000017.1 MAG: Bacteroidales bacterium isolate RUI336 k141_15641751_flag=0_multi=10.9937_len=31973, whole genome shotgun sequence 31,973
JAILPQ010000018.1 MAG: Bacteroidales bacterium isolate RUI336 k141_755764_flag=0_multi=11.9962_len=28939, whole genome shotgun sequence 28,939
JAILPQ010000019.1 MAG: Bacteroidales bacterium isolate RUI336 k141_211114_flag=0_multi=11.9979_len=52074, whole genome shotgun sequence 52,074
JAILPQ010000020.1 MAG: Bacteroidales bacterium isolate RUI336 k141_14598109_flag=1_multi=3.9870_len=2671, whole genome shotgun sequence 2,671
JAILPQ010000021.1 MAG: Bacteroidales bacterium isolate RUI336 k141_4098131_flag=0_multi=11.9969_len=71332, whole genome shotgun sequence 71,332
JAILPQ010000022.1 MAG: Bacteroidales bacterium isolate RUI336 k141_4118594_flag=0_multi=12.2512_len=10272, whole genome shotgun sequence 10,272
JAILPQ010000023.1 MAG: Bacteroidales bacterium isolate RUI336 k141_3644483_flag=1_multi=27.0000_len=106475, whole genome shotgun sequence 106,475
JAILPQ010000024.1 MAG: Bacteroidales bacterium isolate RUI336 k141_16307113_flag=0_multi=12.9989_len=106574, whole genome shotgun sequence 106,574
JAILPQ010000025.1 MAG: Bacteroidales bacterium isolate RUI336 k141_1552610_flag=1_multi=12.0000_len=47180, whole genome shotgun sequence 47,180
JAILPQ010000026.1 MAG: Bacteroidales bacterium isolate RUI336 k141_1558072_flag=0_multi=8.9346_len=2587, whole genome shotgun sequence 2,587
JAILPQ010000027.1 MAG: Bacteroidales bacterium isolate RUI336 k141_3678433_flag=0_multi=18.4739_len=2441, whole genome shotgun sequence 2,441
JAILPQ010000028.1 MAG: Bacteroidales bacterium isolate RUI336 k141_4749904_flag=0_multi=10.9991_len=106405, whole genome shotgun sequence 106,405
JAILPQ010000029.1 MAG: Bacteroidales bacterium isolate RUI336 k141_5917950_flag=0_multi=11.8853_len=2076, whole genome shotgun sequence 2,076
JAILPQ010000030.1 MAG: Bacteroidales bacterium isolate RUI336 k141_8124823_flag=0_multi=12.9264_len=104286, whole genome shotgun sequence 104,286
JAILPQ010000031.1 MAG: Bacteroidales bacterium isolate RUI336 k141_9826471_flag=0_multi=23.4873_len=27127, whole genome shotgun sequence 27,127
JAILPQ010000032.1 MAG: Bacteroidales bacterium isolate RUI336 k141_8770837_flag=1_multi=11.0000_len=79984, whole genome shotgun sequence 79,984
JAILPQ010000033.1 MAG: Bacteroidales bacterium isolate RUI336 k141_8777493_flag=0_multi=10.9871_len=15677, whole genome shotgun sequence 15,677
JAILPQ010000034.1 MAG: Bacteroidales bacterium isolate RUI336 k141_8777502_flag=0_multi=10.9891_len=30443, whole genome shotgun sequence 30,443
JAILPQ010000035.1 MAG: Bacteroidales bacterium isolate RUI336 k141_11586350_flag=1_multi=11.0000_len=2199, whole genome shotgun sequence 2,199
JAILPQ010000036.1 MAG: Bacteroidales bacterium isolate RUI336 k141_6543583_flag=0_multi=12.9971_len=83244, whole genome shotgun sequence 83,244
JAILPQ010000037.1 MAG: Bacteroidales bacterium isolate RUI336 k141_15371986_flag=0_multi=10.0000_len=2340, whole genome shotgun sequence 2,340
JAILPQ010000038.1 MAG: Bacteroidales bacterium isolate RUI336 k141_7716017_flag=0_multi=11.9858_len=15661, whole genome shotgun sequence 15,661
JAILPQ010000039.1 MAG: Bacteroidales bacterium isolate RUI336 k141_7718419_flag=0_multi=71.9824_len=80924, whole genome shotgun sequence 80,924

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory