fast.genomicscompare 6,575 genera of bacteria & archaea

 

JANSYA01 sp024742665 bin.39

Genome identifier: GCA_024742665.1

NCBI assembly name: ASM2474266v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptonemataceae, JANSYA01, JANSYA01 sp024742665

NCBI taxonomy: Bacteria

Scaffolds: 26

Genes: 5,040 Protein-coding: 4,940 RNAs: 64 pseudogenes: 36

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANSYA010000001.1 MAG: bacterium isolate bin.39 k141_345857_length_1690955_cov_211.4465, whole genome shotgun sequence 1,690,955
JANSYA010000002.1 MAG: bacterium isolate bin.39 k141_668434_length_787111_cov_207.0047, whole genome shotgun sequence 787,111
JANSYA010000003.1 MAG: bacterium isolate bin.39 k141_432773_length_441158_cov_204.6315, whole genome shotgun sequence 441,158
JANSYA010000004.1 MAG: bacterium isolate bin.39 k141_721141_length_425313_cov_196.7981, whole genome shotgun sequence 425,313
JANSYA010000005.1 MAG: bacterium isolate bin.39 k141_754504_length_422474_cov_197.6013, whole genome shotgun sequence 422,474
JANSYA010000006.1 MAG: bacterium isolate bin.39 k141_348957_length_405493_cov_210.9759, whole genome shotgun sequence 405,493
JANSYA010000007.1 MAG: bacterium isolate bin.39 k141_204477_length_357738_cov_190.9933, whole genome shotgun sequence 357,738
JANSYA010000008.1 MAG: bacterium isolate bin.39 k141_342365_length_264533_cov_182.0619, whole genome shotgun sequence 264,533
JANSYA010000009.1 MAG: bacterium isolate bin.39 k141_315274_length_243084_cov_223.0140, whole genome shotgun sequence 243,084
JANSYA010000010.1 MAG: bacterium isolate bin.39 k141_224528_length_208524_cov_179.9205, whole genome shotgun sequence 208,524
JANSYA010000011.1 MAG: bacterium isolate bin.39 k141_707263_length_133782_cov_214.9950, whole genome shotgun sequence 133,782
JANSYA010000012.1 MAG: bacterium isolate bin.39 k141_645805_length_122434_cov_210.0355, whole genome shotgun sequence 122,434
JANSYA010000013.1 MAG: bacterium isolate bin.39 k141_678972_length_98084_cov_206.0747, whole genome shotgun sequence 98,084
JANSYA010000014.1 MAG: bacterium isolate bin.39 k141_314551_length_82011_cov_252.5939, whole genome shotgun sequence 82,011
JANSYA010000015.1 MAG: bacterium isolate bin.39 k141_635535_length_81922_cov_185.3210, whole genome shotgun sequence 81,922
JANSYA010000016.1 MAG: bacterium isolate bin.39 k141_33888_length_71376_cov_188.9419, whole genome shotgun sequence 71,376
JANSYA010000017.1 MAG: bacterium isolate bin.39 k141_144625_length_62697_cov_214.0708, whole genome shotgun sequence 62,697
JANSYA010000018.1 MAG: bacterium isolate bin.39 k141_760906_length_54950_cov_215.4074, whole genome shotgun sequence 54,950
JANSYA010000019.1 MAG: bacterium isolate bin.39 k141_73403_length_29157_cov_194.1776, whole genome shotgun sequence 29,157
JANSYA010000020.1 MAG: bacterium isolate bin.39 k141_573884_length_14335_cov_209.1848, whole genome shotgun sequence 14,335
JANSYA010000021.1 MAG: bacterium isolate bin.39 k141_785970_length_8214_cov_233.4781, whole genome shotgun sequence 8,214
JANSYA010000022.1 MAG: bacterium isolate bin.39 k141_396988_length_4825_cov_199.2444, whole genome shotgun sequence 4,825
JANSYA010000023.1 MAG: bacterium isolate bin.39 k141_624325_length_4548_cov_219.7420, whole genome shotgun sequence 4,548
JANSYA010000024.1 MAG: bacterium isolate bin.39 k141_183796_length_4322_cov_218.8866, whole genome shotgun sequence 4,322
JANSYA010000025.1 MAG: bacterium isolate bin.39 k141_357103_length_4178_cov_197.8779, whole genome shotgun sequence 4,178
JANSYA010000026.1 MAG: bacterium isolate bin.39 k141_762815_length_2665_cov_193.5028, whole genome shotgun sequence 2,665

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory