fast.genomicscompare 6,575 genera of bacteria & archaea

 

DVEG01 sp015295835 SKYG93

Genome identifier: GCA_025054815.1

NCBI assembly name: ASM2505481v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Oscillatoriaceae, DVEG01, DVEG01 sp015295835

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Oscillatoriales, Oscillatoriaceae

Scaffolds: 34

Genes: 3,412 Protein-coding: 3,294 RNAs: 52 pseudogenes: 66

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANWZK010000001.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_17589, whole genome shotgun sequence 28,274
JANWZK010000002.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_379444, whole genome shotgun sequence 34,650
JANWZK010000003.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_18016, whole genome shotgun sequence 7,595
JANWZK010000004.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_241546, whole genome shotgun sequence 133,268
JANWZK010000005.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_121856, whole genome shotgun sequence 2,568
JANWZK010000006.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_689139, whole genome shotgun sequence 121,092
JANWZK010000007.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_672466, whole genome shotgun sequence 4,533
JANWZK010000008.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_294786, whole genome shotgun sequence 25,385
JANWZK010000009.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_106334, whole genome shotgun sequence 240,807
JANWZK010000010.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_640097, whole genome shotgun sequence 137,021
JANWZK010000011.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_759895, whole genome shotgun sequence 48,978
JANWZK010000012.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_468466, whole genome shotgun sequence 105,630
JANWZK010000013.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_55816, whole genome shotgun sequence 1,294
JANWZK010000014.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_777082, whole genome shotgun sequence 155,775
JANWZK010000015.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_744227, whole genome shotgun sequence 113,973
JANWZK010000016.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_606439, whole genome shotgun sequence 25,080
JANWZK010000017.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_228558, whole genome shotgun sequence 196,319
JANWZK010000018.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_607396, whole genome shotgun sequence 46,326
JANWZK010000019.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_728250, whole genome shotgun sequence 377,824
JANWZK010000020.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_229946, whole genome shotgun sequence 324,753
JANWZK010000021.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_163352, whole genome shotgun sequence 97,490
JANWZK010000022.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_558115, whole genome shotgun sequence 3,437
JANWZK010000023.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_489037, whole genome shotgun sequence 33,940
JANWZK010000024.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_541042, whole genome shotgun sequence 242,943
JANWZK010000025.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_180631, whole genome shotgun sequence 119,034
JANWZK010000026.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_542110, whole genome shotgun sequence 24,436
JANWZK010000027.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_388835, whole genome shotgun sequence 61,897
JANWZK010000028.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_697386, whole genome shotgun sequence 122,973
JANWZK010000029.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_783080, whole genome shotgun sequence 49,313
JANWZK010000030.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_44924, whole genome shotgun sequence 395,153
JANWZK010000031.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_11799, whole genome shotgun sequence 159,109
JANWZK010000032.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_371843, whole genome shotgun sequence 534,698
JANWZK010000033.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_649300, whole genome shotgun sequence 1,649
JANWZK010000034.1 MAG: Oscillatoriaceae cyanobacterium SKYG93 k141_184850, whole genome shotgun sequence 6,608

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory