fast.genomicscompare 6,575 genera of bacteria & archaea

 

JANXDZ01 sp025059075 SKYB35

Genome identifier: GCA_025059075.1

NCBI assembly name: ASM2505907v1

GTDB taxonomy: Archaea, Thermoproteota, Thermoprotei_A, Sulfolobales, Desulfurococcaceae, JANXDZ01, JANXDZ01 sp025059075

NCBI taxonomy: Archaea, Thermoproteota, Thermoprotei, Sulfolobales

Scaffolds: 19

Genes: 1,420 Protein-coding: 1,360 RNAs: 51 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXDZ010000001.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_1_length_396063_cov_8.250652, whole genome shotgun sequence 396,063
JANXDZ010000002.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_2_length_357037_cov_7.521173, whole genome shotgun sequence 357,037
JANXDZ010000003.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_3_length_221390_cov_7.511240, whole genome shotgun sequence 221,390
JANXDZ010000004.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_4_length_180480_cov_8.022178, whole genome shotgun sequence 180,480
JANXDZ010000005.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_5_length_74524_cov_6.566188, whole genome shotgun sequence 74,524
JANXDZ010000006.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_6_length_65566_cov_7.908351, whole genome shotgun sequence 65,566
JANXDZ010000007.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_7_length_21538_cov_7.197242, whole genome shotgun sequence 21,538
JANXDZ010000008.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_8_length_11693_cov_5.587638, whole genome shotgun sequence 11,693
JANXDZ010000009.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_9_length_2434_cov_2.924480, whole genome shotgun sequence 2,434
JANXDZ010000010.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_10_length_1372_cov_1.810039, whole genome shotgun sequence 1,372
JANXDZ010000011.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_11_length_899_cov_4.618005, whole genome shotgun sequence 899
JANXDZ010000012.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_12_length_854_cov_18.414414, whole genome shotgun sequence 854
JANXDZ010000013.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_13_length_790_cov_4.504909, whole genome shotgun sequence 790
JANXDZ010000014.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_14_length_719_cov_5.366044, whole genome shotgun sequence 719
JANXDZ010000015.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_15_length_698_cov_3.028986, whole genome shotgun sequence 698
JANXDZ010000016.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_16_length_676_cov_1.706177, whole genome shotgun sequence 676
JANXDZ010000017.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_17_length_672_cov_1.714286, whole genome shotgun sequence 672
JANXDZ010000018.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_18_length_616_cov_12.122449, whole genome shotgun sequence 616
JANXDZ010000019.1 MAG: Sulfolobales archaeon isolate SKYB35 NODE_19_length_592_cov_1.390291, whole genome shotgun sequence 592

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory