fast.genomicscompare 6,575 genera of bacteria & archaea

 

WYZ-LMO8 sp025059375 SKYB125

Genome identifier: GCA_025059375.1

NCBI assembly name: ASM2505937v1

GTDB taxonomy: Archaea, Thermoproteota, Methanomethylicia, Nezhaarchaeales, WYZ-LMO8, WYZ-LMO8, WYZ-LMO8 sp025059375

NCBI taxonomy: Archaea, Candidatus Nezhaarchaeota

Scaffolds: 14

Genes: 1,548 Protein-coding: 1,480 RNAs: 54 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXDO010000001.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_1_length_545650_cov_13.821894, whole genome shotgun sequence 545,650
JANXDO010000002.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_2_length_364439_cov_13.648882, whole genome shotgun sequence 364,439
JANXDO010000003.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_3_length_348670_cov_15.164077, whole genome shotgun sequence 348,670
JANXDO010000004.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_4_length_206176_cov_13.669355, whole genome shotgun sequence 206,176
JANXDO010000005.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_5_length_1150_cov_1.641193, whole genome shotgun sequence 1,150
JANXDO010000006.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_6_length_987_cov_1.506593, whole genome shotgun sequence 987
JANXDO010000007.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_7_length_917_cov_1.473436, whole genome shotgun sequence 917
JANXDO010000008.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_8_length_702_cov_2.377600, whole genome shotgun sequence 702
JANXDO010000009.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_9_length_684_cov_2.525535, whole genome shotgun sequence 684
JANXDO010000010.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_10_length_650_cov_2.345550, whole genome shotgun sequence 650
JANXDO010000011.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_11_length_643_cov_2.063604, whole genome shotgun sequence 643
JANXDO010000012.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_12_length_617_cov_1.892593, whole genome shotgun sequence 617
JANXDO010000013.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_13_length_528_cov_1.780488, whole genome shotgun sequence 528
JANXDO010000014.1 MAG: Candidatus Nezhaarchaeota archaeon isolate SKYB125 NODE_14_length_521_cov_1.972973, whole genome shotgun sequence 521

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory