fast.genomicscompare 6,575 genera of bacteria & archaea

 

JANXDC01 sp025059945 SKYB94

Genome identifier: GCA_025059945.1

NCBI assembly name: ASM2505994v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, JANXDC01, JANXDC01, JANXDC01, JANXDC01 sp025059945

NCBI taxonomy: Bacteria, Bacteroidota

Scaffolds: 16

Genes: 1,971 Protein-coding: 1,910 RNAs: 53 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXDC010000001.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_412518, whole genome shotgun sequence 196,581
JANXDC010000002.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_42871, whole genome shotgun sequence 55,984
JANXDC010000003.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_433579, whole genome shotgun sequence 137,263
JANXDC010000004.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_349463, whole genome shotgun sequence 436,301
JANXDC010000005.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_96245, whole genome shotgun sequence 145,386
JANXDC010000006.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_350121, whole genome shotgun sequence 56,429
JANXDC010000007.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_277259, whole genome shotgun sequence 19,925
JANXDC010000008.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_446453, whole genome shotgun sequence 16,036
JANXDC010000009.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_299451, whole genome shotgun sequence 73,783
JANXDC010000010.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_299893, whole genome shotgun sequence 107,929
JANXDC010000011.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_162679, whole genome shotgun sequence 271,687
JANXDC010000012.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_101638, whole genome shotgun sequence 196,313
JANXDC010000013.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_70481, whole genome shotgun sequence 3,394
JANXDC010000014.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_165184, whole genome shotgun sequence 16,947
JANXDC010000015.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_431396, whole genome shotgun sequence 267,188
JANXDC010000016.1 MAG: Bacteroidetes bacterium isolate SKYB94 k141_475006, whole genome shotgun sequence 139,838

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory