fast.genomicscompare 6,575 genera of bacteria & archaea

 

SKYB61 sp025059995 SKYB61

Genome identifier: GCA_025059995.1

NCBI assembly name: ASM2505999v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptonemataceae, SKYB61, SKYB61 sp025059995

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Leptospirales, Leptospiraceae

Scaffolds: 17

Genes: 2,310 Protein-coding: 2,260 RNAs: 41 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXCF010000001.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_1_length_483000_cov_6.465404, whole genome shotgun sequence 483,000
JANXCF010000002.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_2_length_467983_cov_6.578094, whole genome shotgun sequence 467,983
JANXCF010000003.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_3_length_425528_cov_6.601259, whole genome shotgun sequence 425,528
JANXCF010000004.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_4_length_238019_cov_6.403250, whole genome shotgun sequence 238,019
JANXCF010000005.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_5_length_220071_cov_6.431316, whole genome shotgun sequence 220,071
JANXCF010000006.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_6_length_150426_cov_6.469142, whole genome shotgun sequence 150,426
JANXCF010000007.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_7_length_101993_cov_6.312924, whole genome shotgun sequence 101,993
JANXCF010000008.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_8_length_97106_cov_6.387983, whole genome shotgun sequence 97,106
JANXCF010000009.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_9_length_94370_cov_6.477830, whole genome shotgun sequence 94,370
JANXCF010000010.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_10_length_73810_cov_6.172053, whole genome shotgun sequence 73,810
JANXCF010000011.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_11_length_29110_cov_5.760901, whole genome shotgun sequence 29,110
JANXCF010000012.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_12_length_1111_cov_5.224371, whole genome shotgun sequence 1,111
JANXCF010000013.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_13_length_725_cov_4.095679, whole genome shotgun sequence 725
JANXCF010000014.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_14_length_687_cov_16.001639, whole genome shotgun sequence 687
JANXCF010000015.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_15_length_582_cov_1.718812, whole genome shotgun sequence 582
JANXCF010000016.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_16_length_533_cov_2.173246, whole genome shotgun sequence 533
JANXCF010000017.1 MAG: Leptospiraceae bacterium isolate SKYB61 NODE_17_length_510_cov_2.018476, whole genome shotgun sequence 510

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory