fast.genomicscompare 6,575 genera of bacteria & archaea

 

DTER01 sp025060415 SKYB41

Genome identifier: GCA_025060415.1

NCBI assembly name: ASM2506041v1

GTDB taxonomy: Bacteria, Bipolaricaulota, Bipolaricaulia, Bipolaricaulales, Bipolaricaulaceae, DTER01, DTER01 sp025060415

NCBI taxonomy: Bacteria, Candidatus Bipolaricaulota

Scaffolds: 35

Genes: 1,378 Protein-coding: 1,283 RNAs: 54 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXBT010000001.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_1_length_565684_cov_44.120621, whole genome shotgun sequence 565,684
JANXBT010000002.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_2_length_531269_cov_43.854107, whole genome shotgun sequence 531,269
JANXBT010000003.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_3_length_75494_cov_42.334620, whole genome shotgun sequence 75,494
JANXBT010000004.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_4_length_50041_cov_40.334841, whole genome shotgun sequence 50,041
JANXBT010000005.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_5_length_36752_cov_39.792911, whole genome shotgun sequence 36,752
JANXBT010000006.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_6_length_30799_cov_43.639021, whole genome shotgun sequence 30,799
JANXBT010000007.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_7_length_27901_cov_39.811925, whole genome shotgun sequence 27,901
JANXBT010000008.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_8_length_13202_cov_3.309410, whole genome shotgun sequence 13,202
JANXBT010000009.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_9_length_1943_cov_2.295284, whole genome shotgun sequence 1,943
JANXBT010000010.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_10_length_1512_cov_53.190244, whole genome shotgun sequence 1,512
JANXBT010000011.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_11_length_968_cov_3.604938, whole genome shotgun sequence 968
JANXBT010000012.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_12_length_950_cov_7.987400, whole genome shotgun sequence 950
JANXBT010000013.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_13_length_934_cov_56.631272, whole genome shotgun sequence 934
JANXBT010000014.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_14_length_917_cov_1.934524, whole genome shotgun sequence 917
JANXBT010000015.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_15_length_895_cov_8.567237, whole genome shotgun sequence 895
JANXBT010000016.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_16_length_881_cov_35.691542, whole genome shotgun sequence 881
JANXBT010000017.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_17_length_872_cov_13.071698, whole genome shotgun sequence 872
JANXBT010000018.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_18_length_866_cov_2.991128, whole genome shotgun sequence 866
JANXBT010000019.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_19_length_833_cov_10.673280, whole genome shotgun sequence 833
JANXBT010000020.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_20_length_798_cov_2.624133, whole genome shotgun sequence 798
JANXBT010000021.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_21_length_794_cov_1.822873, whole genome shotgun sequence 794
JANXBT010000022.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_22_length_683_cov_19.382838, whole genome shotgun sequence 683
JANXBT010000023.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_23_length_651_cov_80.287456, whole genome shotgun sequence 651
JANXBT010000024.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_24_length_635_cov_19.903226, whole genome shotgun sequence 635
JANXBT010000025.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_25_length_618_cov_3.695009, whole genome shotgun sequence 618
JANXBT010000026.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_26_length_602_cov_2.171429, whole genome shotgun sequence 602
JANXBT010000027.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_27_length_597_cov_1.850000, whole genome shotgun sequence 597
JANXBT010000028.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_28_length_588_cov_3.215264, whole genome shotgun sequence 588
JANXBT010000029.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_29_length_588_cov_1.142857, whole genome shotgun sequence 588
JANXBT010000030.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_30_length_539_cov_2.166667, whole genome shotgun sequence 539
JANXBT010000031.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_31_length_529_cov_1.758850, whole genome shotgun sequence 529
JANXBT010000032.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_32_length_519_cov_2.276018, whole genome shotgun sequence 519
JANXBT010000033.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_33_length_509_cov_7.715278, whole genome shotgun sequence 509
JANXBT010000034.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_34_length_502_cov_5.056471, whole genome shotgun sequence 502
JANXBT010000035.1 MAG: Candidatus Bipolaricaulota bacterium isolate SKYB41 NODE_35_length_500_cov_6.416076, whole genome shotgun sequence 500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory