fast.genomicscompare 6,575 genera of bacteria & archaea

 

SKYB106 sp025061835 SKYB106

Genome identifier: GCA_025061835.1

NCBI assembly name: ASM2506183v1

GTDB taxonomy: Bacteria, Spirochaetota, Brevinematia, DTOW01, DTOW01, SKYB106, SKYB106 sp025061835

NCBI taxonomy: Bacteria, Spirochaetota

Scaffolds: 55

Genes: 1,647 Protein-coding: 1,592 RNAs: 51 pseudogenes: 4

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JANXAC010000001.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_1_length_278130_cov_6.244140, whole genome shotgun sequence 278,130
JANXAC010000002.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_2_length_145688_cov_6.134651, whole genome shotgun sequence 145,688
JANXAC010000003.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_3_length_116119_cov_5.502628, whole genome shotgun sequence 116,119
JANXAC010000004.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_4_length_113135_cov_5.781422, whole genome shotgun sequence 113,135
JANXAC010000005.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_5_length_111386_cov_5.289273, whole genome shotgun sequence 111,386
JANXAC010000006.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_6_length_97716_cov_6.393521, whole genome shotgun sequence 97,716
JANXAC010000007.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_7_length_91980_cov_5.813042, whole genome shotgun sequence 91,980
JANXAC010000008.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_8_length_67482_cov_5.878390, whole genome shotgun sequence 67,482
JANXAC010000009.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_9_length_56478_cov_6.323948, whole genome shotgun sequence 56,478
JANXAC010000010.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_10_length_54135_cov_5.071090, whole genome shotgun sequence 54,135
JANXAC010000011.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_11_length_53313_cov_6.237245, whole genome shotgun sequence 53,313
JANXAC010000012.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_12_length_44214_cov_5.653941, whole genome shotgun sequence 44,214
JANXAC010000013.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_13_length_41627_cov_5.920193, whole genome shotgun sequence 41,627
JANXAC010000014.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_14_length_40139_cov_6.179821, whole genome shotgun sequence 40,139
JANXAC010000015.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_15_length_38315_cov_5.846279, whole genome shotgun sequence 38,315
JANXAC010000016.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_16_length_35405_cov_6.405146, whole genome shotgun sequence 35,405
JANXAC010000017.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_17_length_32942_cov_5.092469, whole genome shotgun sequence 32,942
JANXAC010000018.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_18_length_32014_cov_5.207721, whole genome shotgun sequence 32,014
JANXAC010000019.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_19_length_26481_cov_5.617369, whole genome shotgun sequence 26,481
JANXAC010000020.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_20_length_25010_cov_5.592187, whole genome shotgun sequence 25,010
JANXAC010000021.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_21_length_23948_cov_4.770391, whole genome shotgun sequence 23,948
JANXAC010000022.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_22_length_23625_cov_5.351113, whole genome shotgun sequence 23,625
JANXAC010000023.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_23_length_22465_cov_5.594470, whole genome shotgun sequence 22,465
JANXAC010000024.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_24_length_22454_cov_5.226885, whole genome shotgun sequence 22,454
JANXAC010000025.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_25_length_22416_cov_5.272259, whole genome shotgun sequence 22,416
JANXAC010000026.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_26_length_21805_cov_5.837629, whole genome shotgun sequence 21,805
JANXAC010000027.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_27_length_19099_cov_5.505257, whole genome shotgun sequence 19,099
JANXAC010000028.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_28_length_18918_cov_5.079295, whole genome shotgun sequence 18,918
JANXAC010000029.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_29_length_15361_cov_5.776055, whole genome shotgun sequence 15,361
JANXAC010000030.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_30_length_15251_cov_7.652498, whole genome shotgun sequence 15,251
JANXAC010000031.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_31_length_14101_cov_4.320522, whole genome shotgun sequence 14,101
JANXAC010000032.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_32_length_12074_cov_4.833375, whole genome shotgun sequence 12,074
JANXAC010000033.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_33_length_11002_cov_6.172906, whole genome shotgun sequence 11,002
JANXAC010000034.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_34_length_8595_cov_6.314393, whole genome shotgun sequence 8,595
JANXAC010000035.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_35_length_7202_cov_2.837754, whole genome shotgun sequence 7,202
JANXAC010000036.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_36_length_5840_cov_3.762624, whole genome shotgun sequence 5,840
JANXAC010000037.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_37_length_5601_cov_3.517741, whole genome shotgun sequence 5,601
JANXAC010000038.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_38_length_3982_cov_4.086556, whole genome shotgun sequence 3,982
JANXAC010000039.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_39_length_3555_cov_4.092294, whole genome shotgun sequence 3,555
JANXAC010000040.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_40_length_3129_cov_3.043250, whole genome shotgun sequence 3,129
JANXAC010000041.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_41_length_2518_cov_4.230643, whole genome shotgun sequence 2,518
JANXAC010000042.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_42_length_2450_cov_2.775390, whole genome shotgun sequence 2,450
JANXAC010000043.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_43_length_1871_cov_5.585284, whole genome shotgun sequence 1,871
JANXAC010000044.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_44_length_1722_cov_3.547720, whole genome shotgun sequence 1,722
JANXAC010000045.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_45_length_1521_cov_5.452909, whole genome shotgun sequence 1,521
JANXAC010000046.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_46_length_1492_cov_3.287633, whole genome shotgun sequence 1,492
JANXAC010000047.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_47_length_961_cov_2.095023, whole genome shotgun sequence 961
JANXAC010000048.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_48_length_740_cov_2.730015, whole genome shotgun sequence 740
JANXAC010000049.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_49_length_735_cov_8.876900, whole genome shotgun sequence 735
JANXAC010000050.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_50_length_722_cov_2.083721, whole genome shotgun sequence 722
JANXAC010000051.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_51_length_720_cov_2.401244, whole genome shotgun sequence 720
JANXAC010000052.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_52_length_707_cov_5.903175, whole genome shotgun sequence 707
JANXAC010000053.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_53_length_659_cov_2.972509, whole genome shotgun sequence 659
JANXAC010000054.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_54_length_656_cov_3.347150, whole genome shotgun sequence 656
JANXAC010000055.1 MAG: Spirochaetes bacterium isolate SKYB106 NODE_55_length_588_cov_2.142857, whole genome shotgun sequence 588

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory