fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAG-177 sp003514385 VEG01_HAM_0041

Genome identifier: GCA_025992795.1

NCBI assembly name: ASM2599279v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, CAG-177, CAG-177 sp003514385

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae

Scaffolds: 1

Genes: 2,188 Protein-coding: 2,101 RNAs: 69 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
DAJPGE010000001.1 MAG TPA_asm: Oscillospiraceae bacterium isolate VEG01_HAM_0041 s256.ctg000404c, whole genome shotgun sequence 2,293,428

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory