fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAG-488 sp000434915 VEG01_HAM_0042

Genome identifier: GCA_025993095.1

NCBI assembly name: ASM2599309v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, CAG-488, CAG-488 sp000434915

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae

Scaffolds: 1

Genes: 2,210 Protein-coding: 2,115 RNAs: 76 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
DAJPFP010000001.1 MAG TPA_asm: Oscillospiraceae bacterium isolate VEG01_HAM_0042 s262.ctg000412c, whole genome shotgun sequence 2,437,032

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory