fast.genomicscompare 6,575 genera of bacteria & archaea

 

BPHE01 sp026003395 KatS3mg034

Genome identifier: GCA_026003395.1

NCBI assembly name: ASM2600339v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, BPHE01, BPHE01, BPHE01, BPHE01 sp026003395

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Vicingaceae

Scaffolds: 33

Genes: 2,229 Protein-coding: 2,187 RNAs: 42 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
BPHE01000001.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, scaffold_2848, whole genome shotgun sequence 333,507
BPHE01000002.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_104, whole genome shotgun sequence 288,548
BPHE01000003.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, scaffold_294, whole genome shotgun sequence 254,548
BPHE01000004.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_4386, whole genome shotgun sequence 200,897
BPHE01000005.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_798, whole genome shotgun sequence 129,664
BPHE01000006.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_4281, whole genome shotgun sequence 125,957
BPHE01000007.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1315, whole genome shotgun sequence 121,376
BPHE01000008.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_3433, whole genome shotgun sequence 109,715
BPHE01000009.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_4413, whole genome shotgun sequence 97,698
BPHE01000010.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_2548, whole genome shotgun sequence 87,697
BPHE01000011.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_86, whole genome shotgun sequence 84,942
BPHE01000012.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1472, whole genome shotgun sequence 76,405
BPHE01000013.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_749, whole genome shotgun sequence 73,967
BPHE01000014.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_2608, whole genome shotgun sequence 69,107
BPHE01000015.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_123, whole genome shotgun sequence 52,610
BPHE01000016.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1407, whole genome shotgun sequence 47,153
BPHE01000017.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1376, whole genome shotgun sequence 41,585
BPHE01000018.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_4140, whole genome shotgun sequence 38,126
BPHE01000019.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_5872, whole genome shotgun sequence 37,556
BPHE01000020.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1981, whole genome shotgun sequence 37,511
BPHE01000021.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_5198, whole genome shotgun sequence 36,843
BPHE01000022.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_2100, whole genome shotgun sequence 36,004
BPHE01000023.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_2003, whole genome shotgun sequence 28,621
BPHE01000024.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_17119, whole genome shotgun sequence 19,955
BPHE01000025.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_3341, whole genome shotgun sequence 17,797
BPHE01000026.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1411, whole genome shotgun sequence 15,955
BPHE01000027.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_850, whole genome shotgun sequence 14,544
BPHE01000028.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1921, whole genome shotgun sequence 14,362
BPHE01000029.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_386, whole genome shotgun sequence 13,048
BPHE01000030.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_1911, whole genome shotgun sequence 11,403
BPHE01000031.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_822, whole genome shotgun sequence 10,184
BPHE01000032.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_4939, whole genome shotgun sequence 9,827
BPHE01000033.1 MAG: Vicingaceae bacterium KatS3mg034 DNA, contig_3136, whole genome shotgun sequence 5,892

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory