fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAHCIT01 sp026129095 TGS_FEN1

Genome identifier: GCA_026129095.1

NCBI assembly name: ASM2612909v1

GTDB taxonomy: Bacteria, JAGRBM01, JAGRBM01, JAGRBM01, JAHCIT01, JAHCIT01, JAHCIT01 sp026129095

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 23

Genes: 3,214 Protein-coding: 3,144 RNAs: 53 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHCIT010000001.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_1, whole genome shotgun sequence 618,770
JAHCIT010000002.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_2, whole genome shotgun sequence 560,773
JAHCIT010000003.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_3, whole genome shotgun sequence 376,523
JAHCIT010000004.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_4, whole genome shotgun sequence 334,849
JAHCIT010000005.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_5, whole genome shotgun sequence 319,752
JAHCIT010000006.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_6, whole genome shotgun sequence 259,610
JAHCIT010000007.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_7, whole genome shotgun sequence 219,939
JAHCIT010000008.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_8, whole genome shotgun sequence 208,373
JAHCIT010000009.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_9, whole genome shotgun sequence 160,914
JAHCIT010000010.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_10, whole genome shotgun sequence 134,199
JAHCIT010000011.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_11, whole genome shotgun sequence 107,069
JAHCIT010000012.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_12, whole genome shotgun sequence 72,209
JAHCIT010000013.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_13, whole genome shotgun sequence 64,886
JAHCIT010000014.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_14, whole genome shotgun sequence 43,297
JAHCIT010000015.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_15, whole genome shotgun sequence 34,870
JAHCIT010000016.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_16, whole genome shotgun sequence 34,537
JAHCIT010000017.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_17, whole genome shotgun sequence 30,482
JAHCIT010000018.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_18, whole genome shotgun sequence 28,826
JAHCIT010000019.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_19, whole genome shotgun sequence 18,147
JAHCIT010000020.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_20, whole genome shotgun sequence 17,522
JAHCIT010000021.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_21, whole genome shotgun sequence 13,509
JAHCIT010000022.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_22, whole genome shotgun sequence 6,376
JAHCIT010000023.1 MAG: Deltaproteobacteria bacterium isolate TGS_FEN1 FEN1_23, whole genome shotgun sequence 3,084

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory