fast.genomicscompare 6,575 genera of bacteria & archaea

 

WACF01 sp026192395 005FR1

Genome identifier: GCA_026192395.1

NCBI assembly name: ASM2619239v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, WACF01, WACF01 sp026192395

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 10

Genes: 3,771 Protein-coding: 3,679 RNAs: 48 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WACF01000001.1 Proteobacteria bacterium 005FR1 AFADKFBB_1, whole genome shotgun sequence 3,623,718
WACF01000002.1 Proteobacteria bacterium 005FR1 AFADKFBB_2, whole genome shotgun sequence 583,255
WACF01000003.1 Proteobacteria bacterium 005FR1 AFADKFBB_3, whole genome shotgun sequence 57,662
WACF01000004.1 Proteobacteria bacterium 005FR1 AFADKFBB_4, whole genome shotgun sequence 35,407
WACF01000005.1 Proteobacteria bacterium 005FR1 AFADKFBB_5, whole genome shotgun sequence 16,674
WACF01000006.1 Proteobacteria bacterium 005FR1 AFADKFBB_6, whole genome shotgun sequence 15,723
WACF01000007.1 Proteobacteria bacterium 005FR1 AFADKFBB_7, whole genome shotgun sequence 5,676
WACF01000008.1 Proteobacteria bacterium 005FR1 AFADKFBB_8, whole genome shotgun sequence 956
WACF01000009.1 Proteobacteria bacterium 005FR1 AFADKFBB_9, whole genome shotgun sequence 777
WACF01000010.1 Proteobacteria bacterium 005FR1 AFADKFBB_10, whole genome shotgun sequence 555

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory