fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA10183 sp026387235 LacPavin_0920_SED5_MAG_41_13

Genome identifier: GCA_026387235.1

NCBI assembly name: ASM2638723v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, Gorgyraeales, Gorgyraeaceae, UBA10183, UBA10183 sp026387235

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 69

Genes: 1,518 Protein-coding: 1,455 RNAs: 48 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAPLMD010000001.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_398571, whole genome shotgun sequence 1,711
JAPLMD010000002.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1312941, whole genome shotgun sequence 8,805
JAPLMD010000003.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_359473, whole genome shotgun sequence 5,724
JAPLMD010000004.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_757091, whole genome shotgun sequence 43,342
JAPLMD010000005.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_449493, whole genome shotgun sequence 12,217
JAPLMD010000006.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_960602, whole genome shotgun sequence 11,041
JAPLMD010000007.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2148931, whole genome shotgun sequence 29,603
JAPLMD010000008.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1007894, whole genome shotgun sequence 16,106
JAPLMD010000009.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1432794, whole genome shotgun sequence 27,561
JAPLMD010000010.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_146159, whole genome shotgun sequence 3,639
JAPLMD010000011.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_80586, whole genome shotgun sequence 3,179
JAPLMD010000012.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2525066, whole genome shotgun sequence 26,078
JAPLMD010000013.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_752108, whole genome shotgun sequence 10,109
JAPLMD010000014.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2260384, whole genome shotgun sequence 30,073
JAPLMD010000015.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2905280, whole genome shotgun sequence 8,971
JAPLMD010000016.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_385134, whole genome shotgun sequence 15,936
JAPLMD010000017.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1897669, whole genome shotgun sequence 3,232
JAPLMD010000018.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1964813, whole genome shotgun sequence 5,463
JAPLMD010000019.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1990004, whole genome shotgun sequence 22,747
JAPLMD010000020.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2052547, whole genome shotgun sequence 8,281
JAPLMD010000021.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1125156, whole genome shotgun sequence 27,177
JAPLMD010000022.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2340248, whole genome shotgun sequence 18,897
JAPLMD010000023.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_174070, whole genome shotgun sequence 15,870
JAPLMD010000024.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2931116, whole genome shotgun sequence 40,823
JAPLMD010000025.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_985335, whole genome shotgun sequence 33,361
JAPLMD010000026.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_932297, whole genome shotgun sequence 65,534
JAPLMD010000027.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1132084, whole genome shotgun sequence 8,503
JAPLMD010000028.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2117323, whole genome shotgun sequence 24,657
JAPLMD010000029.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_569182, whole genome shotgun sequence 19,632
JAPLMD010000030.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2740631, whole genome shotgun sequence 14,714
JAPLMD010000031.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_251637, whole genome shotgun sequence 25,925
JAPLMD010000032.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2688619, whole genome shotgun sequence 8,731
JAPLMD010000033.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1532414, whole genome shotgun sequence 5,378
JAPLMD010000034.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_3192868, whole genome shotgun sequence 3,011
JAPLMD010000035.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_361451, whole genome shotgun sequence 24,771
JAPLMD010000036.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_69317, whole genome shotgun sequence 8,180
JAPLMD010000037.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1956805, whole genome shotgun sequence 12,016
JAPLMD010000038.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_878407, whole genome shotgun sequence 15,083
JAPLMD010000039.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2475530, whole genome shotgun sequence 39,861
JAPLMD010000040.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2506914, whole genome shotgun sequence 3,032
JAPLMD010000041.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_10412, whole genome shotgun sequence 34,150
JAPLMD010000042.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_797038, whole genome shotgun sequence 69,217
JAPLMD010000043.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1592639, whole genome shotgun sequence 21,330
JAPLMD010000044.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_439492, whole genome shotgun sequence 52,969
JAPLMD010000045.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1798327, whole genome shotgun sequence 39,392
JAPLMD010000046.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2333543, whole genome shotgun sequence 25,684
JAPLMD010000047.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1520405, whole genome shotgun sequence 8,349
JAPLMD010000048.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1979931, whole genome shotgun sequence 31,285
JAPLMD010000049.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_297598, whole genome shotgun sequence 16,366
JAPLMD010000050.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_3225675, whole genome shotgun sequence 3,413
JAPLMD010000051.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1004923, whole genome shotgun sequence 33,108
JAPLMD010000052.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_855421, whole genome shotgun sequence 12,151
JAPLMD010000053.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1933917, whole genome shotgun sequence 10,787
JAPLMD010000054.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_329181, whole genome shotgun sequence 78,349
JAPLMD010000055.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1607027, whole genome shotgun sequence 16,391
JAPLMD010000056.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2570998, whole genome shotgun sequence 25,104
JAPLMD010000057.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1342120, whole genome shotgun sequence 8,187
JAPLMD010000058.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1594388, whole genome shotgun sequence 22,767
JAPLMD010000059.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_349152, whole genome shotgun sequence 13,262
JAPLMD010000060.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_675826, whole genome shotgun sequence 4,267
JAPLMD010000061.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_520002, whole genome shotgun sequence 4,696
JAPLMD010000062.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_3299746, whole genome shotgun sequence 13,857
JAPLMD010000063.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2843085, whole genome shotgun sequence 18,993
JAPLMD010000064.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_629835, whole genome shotgun sequence 25,032
JAPLMD010000065.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_914082, whole genome shotgun sequence 8,472
JAPLMD010000066.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1215709, whole genome shotgun sequence 49,988
JAPLMD010000067.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_2706122, whole genome shotgun sequence 6,898
JAPLMD010000068.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_1386854, whole genome shotgun sequence 25,165
JAPLMD010000069.1 MAG: Candidatus Omnitrophota bacterium isolate LacPavin_0920_SED5_MAG_41_13 LacPavin_0920_SED5_scaffold_654521, whole genome shotgun sequence 107,731

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory