fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bin25 sp026709415 CAR3_bin_11

Genome identifier: GCA_026709415.1

NCBI assembly name: ASM2670941v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Bin25, Bin25 sp026709415

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae

Scaffolds: 34

Genes: 2,360 Protein-coding: 2,297 RNAs: 41 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAPOSZ010000001.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_871_length_20430_cov_113.613, whole genome shotgun sequence 20,430
JAPOSZ010000002.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_252_length_48270_cov_125.214, whole genome shotgun sequence 48,270
JAPOSZ010000003.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_17_length_169879_cov_104.397, whole genome shotgun sequence 169,879
JAPOSZ010000004.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_3369_length_5095_cov_121.759, whole genome shotgun sequence 5,095
JAPOSZ010000005.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_943_length_18970_cov_97.9308, whole genome shotgun sequence 18,970
JAPOSZ010000006.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_130_length_67916_cov_108.564, whole genome shotgun sequence 67,916
JAPOSZ010000007.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_16_length_171810_cov_131.914, whole genome shotgun sequence 171,810
JAPOSZ010000008.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_4165_length_4148_cov_3.0259, whole genome shotgun sequence 4,148
JAPOSZ010000009.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_102_length_78425_cov_122.523, whole genome shotgun sequence 78,425
JAPOSZ010000010.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_300_length_42115_cov_111.199, whole genome shotgun sequence 42,115
JAPOSZ010000011.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_1491_length_12337_cov_104.167, whole genome shotgun sequence 12,337
JAPOSZ010000012.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_49_length_114644_cov_108.012, whole genome shotgun sequence 114,644
JAPOSZ010000013.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_85_length_86064_cov_136.151, whole genome shotgun sequence 86,064
JAPOSZ010000014.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_5_length_241507_cov_111.808, whole genome shotgun sequence 241,507
JAPOSZ010000015.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_1001_length_18165_cov_94.1061, whole genome shotgun sequence 18,165
JAPOSZ010000016.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_1114_length_16439_cov_97.172, whole genome shotgun sequence 16,439
JAPOSZ010000017.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_5692_length_3133_cov_3.49903, whole genome shotgun sequence 3,133
JAPOSZ010000018.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_33_length_131808_cov_123.516, whole genome shotgun sequence 131,808
JAPOSZ010000019.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_338_length_40263_cov_114.108, whole genome shotgun sequence 40,263
JAPOSZ010000020.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_5277_length_3372_cov_4.43172, whole genome shotgun sequence 3,372
JAPOSZ010000021.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_52_length_106138_cov_110.378, whole genome shotgun sequence 106,138
JAPOSZ010000022.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_175_length_59146_cov_109.907, whole genome shotgun sequence 59,146
JAPOSZ010000023.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_246_length_49037_cov_127.649, whole genome shotgun sequence 49,037
JAPOSZ010000024.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_1990_length_8771_cov_125.542, whole genome shotgun sequence 8,771
JAPOSZ010000025.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_6078_length_2962_cov_222.69, whole genome shotgun sequence 2,962
JAPOSZ010000026.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_2153_length_8003_cov_103.187, whole genome shotgun sequence 8,003
JAPOSZ010000027.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_31_length_134858_cov_104.607, whole genome shotgun sequence 134,858
JAPOSZ010000028.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_8711_length_2152_cov_4.37148, whole genome shotgun sequence 2,152
JAPOSZ010000029.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_84_length_86886_cov_100.483, whole genome shotgun sequence 86,886
JAPOSZ010000030.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_1_length_299538_cov_117.061, whole genome shotgun sequence 299,538
JAPOSZ010000031.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_18_length_163727_cov_122.482, whole genome shotgun sequence 163,727
JAPOSZ010000032.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_3_length_250941_cov_110.317, whole genome shotgun sequence 250,941
JAPOSZ010000033.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_845_length_20988_cov_129.387, whole genome shotgun sequence 20,988
JAPOSZ010000034.1 MAG: Flavobacteriaceae bacterium isolate CAR3_bin_11 NODE_13_length_174178_cov_96.1746, whole genome shotgun sequence 174,178

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory