fast.genomicscompare 6,575 genera of bacteria & archaea

 

FEB-22 sp003105195 FR_38

Genome identifier: GCA_027493405.1

NCBI assembly name: ASM2749340v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Xanthobacteraceae, FEB-22, FEB-22 sp003105195

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Xanthobacteraceae

Scaffolds: 48

Genes: 5,616 Protein-coding: 5,102 RNAs: 51 pseudogenes: 463

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAOSKV010000001.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s1, whole genome shotgun sequence 1,284,434
JAOSKV010000002.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s10, whole genome shotgun sequence 209,133
JAOSKV010000003.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s11, whole genome shotgun sequence 275,784
JAOSKV010000004.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s12, whole genome shotgun sequence 353,717
JAOSKV010000005.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s13, whole genome shotgun sequence 140,250
JAOSKV010000006.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s14, whole genome shotgun sequence 102,693
JAOSKV010000007.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s15, whole genome shotgun sequence 198,520
JAOSKV010000008.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s16, whole genome shotgun sequence 143,372
JAOSKV010000009.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s17, whole genome shotgun sequence 69,242
JAOSKV010000010.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s18, whole genome shotgun sequence 103,663
JAOSKV010000011.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s19, whole genome shotgun sequence 42,381
JAOSKV010000012.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s2, whole genome shotgun sequence 457,459
JAOSKV010000013.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s20, whole genome shotgun sequence 20,625
JAOSKV010000014.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s21, whole genome shotgun sequence 16,597
JAOSKV010000015.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s22, whole genome shotgun sequence 14,893
JAOSKV010000016.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s23, whole genome shotgun sequence 14,853
JAOSKV010000017.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s24, whole genome shotgun sequence 14,305
JAOSKV010000018.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s25, whole genome shotgun sequence 9,588
JAOSKV010000019.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s26, whole genome shotgun sequence 8,880
JAOSKV010000020.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s27, whole genome shotgun sequence 8,062
JAOSKV010000021.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s28, whole genome shotgun sequence 5,437
JAOSKV010000022.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s29, whole genome shotgun sequence 4,883
JAOSKV010000023.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s3, whole genome shotgun sequence 425,505
JAOSKV010000024.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s30, whole genome shotgun sequence 5,084
JAOSKV010000025.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s31, whole genome shotgun sequence 4,798
JAOSKV010000026.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s32, whole genome shotgun sequence 4,794
JAOSKV010000027.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s33, whole genome shotgun sequence 4,769
JAOSKV010000028.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s34, whole genome shotgun sequence 4,714
JAOSKV010000029.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s35, whole genome shotgun sequence 4,659
JAOSKV010000030.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s36, whole genome shotgun sequence 3,544
JAOSKV010000031.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s37, whole genome shotgun sequence 3,194
JAOSKV010000032.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s38, whole genome shotgun sequence 3,136
JAOSKV010000033.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s39, whole genome shotgun sequence 3,009
JAOSKV010000034.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s4, whole genome shotgun sequence 273,476
JAOSKV010000035.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s40, whole genome shotgun sequence 2,843
JAOSKV010000036.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s41, whole genome shotgun sequence 2,705
JAOSKV010000037.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s42, whole genome shotgun sequence 2,694
JAOSKV010000038.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s43, whole genome shotgun sequence 2,680
JAOSKV010000039.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s44, whole genome shotgun sequence 2,479
JAOSKV010000040.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s45, whole genome shotgun sequence 2,219
JAOSKV010000041.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s46, whole genome shotgun sequence 2,155
JAOSKV010000042.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s48, whole genome shotgun sequence 1,966
JAOSKV010000043.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s49, whole genome shotgun sequence 1,481
JAOSKV010000044.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s5, whole genome shotgun sequence 321,622
JAOSKV010000045.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s6, whole genome shotgun sequence 286,356
JAOSKV010000046.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s7, whole genome shotgun sequence 329,459
JAOSKV010000047.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s8, whole genome shotgun sequence 210,118
JAOSKV010000048.1 MAG: Xanthobacteraceae bacterium isolate FR_38 FR-Xanthobacteraceae-1_s9, whole genome shotgun sequence 298,412

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory