fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA3439 sp028382965 AH-135-F23

Genome identifier: GCA_028382965.1

NCBI assembly name: ASM2838296v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Puniceispirillales, Puniceispirillaceae, UBA3439, UBA3439 sp028382965

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Candidatus Puniceispirillum

Scaffolds: 39

Genes: 2,263 Protein-coding: 2,200 RNAs: 44 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAOEUK010000001.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_1, whole genome shotgun sequence 606,560
JAOEUK010000002.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_2, whole genome shotgun sequence 230,737
JAOEUK010000003.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_3, whole genome shotgun sequence 219,123
JAOEUK010000004.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_4, whole genome shotgun sequence 156,463
JAOEUK010000005.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_5, whole genome shotgun sequence 153,970
JAOEUK010000006.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_6, whole genome shotgun sequence 139,093
JAOEUK010000007.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_7, whole genome shotgun sequence 130,110
JAOEUK010000008.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_8, whole genome shotgun sequence 100,890
JAOEUK010000009.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_9, whole genome shotgun sequence 73,216
JAOEUK010000010.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_10, whole genome shotgun sequence 71,565
JAOEUK010000011.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_11, whole genome shotgun sequence 56,908
JAOEUK010000012.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_12, whole genome shotgun sequence 56,462
JAOEUK010000013.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_13, whole genome shotgun sequence 44,574
JAOEUK010000014.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_14, whole genome shotgun sequence 41,289
JAOEUK010000015.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_15, whole genome shotgun sequence 40,217
JAOEUK010000016.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_16, whole genome shotgun sequence 36,116
JAOEUK010000017.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_17, whole genome shotgun sequence 31,511
JAOEUK010000018.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_18, whole genome shotgun sequence 31,391
JAOEUK010000019.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_19, whole genome shotgun sequence 16,537
JAOEUK010000020.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_20, whole genome shotgun sequence 16,422
JAOEUK010000021.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_21, whole genome shotgun sequence 15,656
JAOEUK010000022.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_22, whole genome shotgun sequence 15,453
JAOEUK010000023.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_23, whole genome shotgun sequence 12,783
JAOEUK010000024.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_24, whole genome shotgun sequence 10,789
JAOEUK010000025.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_25, whole genome shotgun sequence 10,729
JAOEUK010000026.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_26, whole genome shotgun sequence 7,259
JAOEUK010000027.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_27, whole genome shotgun sequence 7,228
JAOEUK010000028.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_28, whole genome shotgun sequence 6,323
JAOEUK010000029.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_29, whole genome shotgun sequence 5,410
JAOEUK010000030.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_30, whole genome shotgun sequence 4,597
JAOEUK010000031.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_31, whole genome shotgun sequence 4,218
JAOEUK010000032.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_32, whole genome shotgun sequence 4,144
JAOEUK010000033.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_33, whole genome shotgun sequence 3,859
JAOEUK010000034.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_34, whole genome shotgun sequence 3,399
JAOEUK010000035.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_35, whole genome shotgun sequence 2,712
JAOEUK010000036.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_36, whole genome shotgun sequence 2,675
JAOEUK010000037.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_37, whole genome shotgun sequence 2,623
JAOEUK010000038.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_38, whole genome shotgun sequence 2,461
JAOEUK010000039.1 Candidatus Puniceispirillum sp. isolate AH-135-F23 AH-135-F23_NODE_39, whole genome shotgun sequence 2,182

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory