fast.genomicscompare 6,575 genera of bacteria & archaea

 

DUUA01 sp028691515 STD2_253

Genome identifier: GCA_028691515.1

NCBI assembly name: ASM2869151v1

GTDB taxonomy: Bacteria, Bacillota_I, Bacilli_A, ML615J-28, CAG-698, DUUA01, DUUA01 sp028691515

NCBI taxonomy: Bacteria, Bacillota, Bacilli

Scaffolds: 24

Genes: 1,144 Protein-coding: 1,098 RNAs: 39 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUZE010000001.1 MAG: Bacilli bacterium isolate STD2_253 NODE_183_length_171346_cov_51.606113_Sandtown_D2, whole genome shotgun sequence 171,346
JAQUZE010000002.1 MAG: Bacilli bacterium isolate STD2_253 NODE_219_length_159942_cov_50.114195_Sandtown_D2, whole genome shotgun sequence 159,942
JAQUZE010000003.1 MAG: Bacilli bacterium isolate STD2_253 NODE_376_length_130214_cov_43.642747_Sandtown_D2, whole genome shotgun sequence 130,214
JAQUZE010000004.1 MAG: Bacilli bacterium isolate STD2_253 NODE_520_length_111447_cov_41.586211_Sandtown_D2, whole genome shotgun sequence 111,447
JAQUZE010000005.1 MAG: Bacilli bacterium isolate STD2_253 NODE_678_length_96950_cov_47.146918_Sandtown_D2, whole genome shotgun sequence 96,950
JAQUZE010000006.1 MAG: Bacilli bacterium isolate STD2_253 NODE_841_length_86140_cov_41.000047_Sandtown_D2, whole genome shotgun sequence 86,140
JAQUZE010000007.1 MAG: Bacilli bacterium isolate STD2_253 NODE_1119_length_75103_cov_40.171001_Sandtown_D2, whole genome shotgun sequence 75,103
JAQUZE010000008.1 MAG: Bacilli bacterium isolate STD2_253 NODE_1427_length_66683_cov_43.182072_Sandtown_D2, whole genome shotgun sequence 66,683
JAQUZE010000009.1 MAG: Bacilli bacterium isolate STD2_253 NODE_1543_length_63597_cov_42.046668_Sandtown_D2, whole genome shotgun sequence 63,597
JAQUZE010000010.1 MAG: Bacilli bacterium isolate STD2_253 NODE_2693_length_45819_cov_41.456995_Sandtown_D2, whole genome shotgun sequence 45,819
JAQUZE010000011.1 MAG: Bacilli bacterium isolate STD2_253 NODE_4297_length_34993_cov_42.455946_Sandtown_D2, whole genome shotgun sequence 34,993
JAQUZE010000012.1 MAG: Bacilli bacterium isolate STD2_253 NODE_4441_length_34264_cov_46.563934_Sandtown_D2, whole genome shotgun sequence 34,264
JAQUZE010000013.1 MAG: Bacilli bacterium isolate STD2_253 NODE_8287_length_22468_cov_50.578667_Sandtown_D2, whole genome shotgun sequence 22,468
JAQUZE010000014.1 MAG: Bacilli bacterium isolate STD2_253 NODE_8648_length_21856_cov_42.397119_Sandtown_D2, whole genome shotgun sequence 21,856
JAQUZE010000015.1 MAG: Bacilli bacterium isolate STD2_253 NODE_9452_length_20611_cov_45.486965_Sandtown_D2, whole genome shotgun sequence 20,611
JAQUZE010000016.1 MAG: Bacilli bacterium isolate STD2_253 NODE_9704_length_20218_cov_42.153551_Sandtown_D2, whole genome shotgun sequence 20,218
JAQUZE010000017.1 MAG: Bacilli bacterium isolate STD2_253 NODE_13784_length_15877_cov_37.735175_Sandtown_D2, whole genome shotgun sequence 15,877
JAQUZE010000018.1 MAG: Bacilli bacterium isolate STD2_253 NODE_24622_length_10596_cov_43.582004_Sandtown_D2, whole genome shotgun sequence 10,596
JAQUZE010000019.1 MAG: Bacilli bacterium isolate STD2_253 NODE_30807_length_9083_cov_45.951318_Sandtown_D2, whole genome shotgun sequence 9,083
JAQUZE010000020.1 MAG: Bacilli bacterium isolate STD2_253 NODE_34345_length_8419_cov_39.779908_Sandtown_D2, whole genome shotgun sequence 8,419
JAQUZE010000021.1 MAG: Bacilli bacterium isolate STD2_253 NODE_36846_length_8007_cov_45.463706_Sandtown_D2, whole genome shotgun sequence 8,007
JAQUZE010000022.1 MAG: Bacilli bacterium isolate STD2_253 NODE_42445_length_7275_cov_41.786234_Sandtown_D2, whole genome shotgun sequence 7,275
JAQUZE010000023.1 MAG: Bacilli bacterium isolate STD2_253 NODE_47522_length_6725_cov_51.402243_Sandtown_D2, whole genome shotgun sequence 6,725
JAQUZE010000024.1 MAG: Bacilli bacterium isolate STD2_253 NODE_85699_length_4572_cov_39.552081_Sandtown_D2, whole genome shotgun sequence 4,572

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory