fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGUYA01 sp028717245 STB_42

Genome identifier: GCA_028710715.1

NCBI assembly name: ASM2871071v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, Gygaellales, Profunditerraquicolaceae, JAGUYA01, JAGUYA01 sp028717245

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 25

Genes: 1,556 Protein-coding: 1,498 RNAs: 52 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQTTO010000001.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_52_length_374736_cov_11.293405_Sandtown_B, whole genome shotgun sequence 374,736
JAQTTO010000002.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_91_length_262829_cov_11.407850_Sandtown_B, whole genome shotgun sequence 262,829
JAQTTO010000003.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_257_length_149702_cov_11.996142_Sandtown_B, whole genome shotgun sequence 149,702
JAQTTO010000004.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_269_length_146951_cov_11.233804_Sandtown_B, whole genome shotgun sequence 146,951
JAQTTO010000005.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_326_length_128568_cov_11.447630_Sandtown_B, whole genome shotgun sequence 128,568
JAQTTO010000006.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_488_length_96260_cov_11.170503_Sandtown_B, whole genome shotgun sequence 96,260
JAQTTO010000007.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_618_length_82162_cov_11.260913_Sandtown_B, whole genome shotgun sequence 82,162
JAQTTO010000008.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_817_length_68910_cov_11.465159_Sandtown_B, whole genome shotgun sequence 68,910
JAQTTO010000009.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_820_length_68834_cov_11.236919_Sandtown_B, whole genome shotgun sequence 68,834
JAQTTO010000010.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_884_length_65236_cov_11.262683_Sandtown_B, whole genome shotgun sequence 65,236
JAQTTO010000011.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_1744_length_44224_cov_11.981949_Sandtown_B, whole genome shotgun sequence 44,224
JAQTTO010000012.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_1820_length_43126_cov_14.059536_Sandtown_B, whole genome shotgun sequence 43,126
JAQTTO010000013.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_2308_length_37542_cov_10.944060_Sandtown_B, whole genome shotgun sequence 37,542
JAQTTO010000014.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_2383_length_36619_cov_10.955524_Sandtown_B, whole genome shotgun sequence 36,619
JAQTTO010000015.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_3045_length_31220_cov_12.140257_Sandtown_B, whole genome shotgun sequence 31,220
JAQTTO010000016.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_3931_length_26567_cov_11.085514_Sandtown_B, whole genome shotgun sequence 26,567
JAQTTO010000017.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_16522_length_10503_cov_11.087221_Sandtown_B, whole genome shotgun sequence 10,503
JAQTTO010000018.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_20999_length_9007_cov_14.581306_Sandtown_B, whole genome shotgun sequence 9,007
JAQTTO010000019.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_21247_length_8938_cov_14.426966_Sandtown_B, whole genome shotgun sequence 8,938
JAQTTO010000020.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_29299_length_7286_cov_15.116217_Sandtown_B, whole genome shotgun sequence 7,286
JAQTTO010000021.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_29497_length_7255_cov_15.582912_Sandtown_B, whole genome shotgun sequence 7,255
JAQTTO010000022.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_54720_length_4983_cov_12.968081_Sandtown_B, whole genome shotgun sequence 4,983
JAQTTO010000023.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_59051_length_4762_cov_14.020496_Sandtown_B, whole genome shotgun sequence 4,762
JAQTTO010000024.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_70200_length_4311_cov_14.714866_Sandtown_B, whole genome shotgun sequence 4,311
JAQTTO010000025.1 MAG: Candidatus Omnitrophota bacterium isolate STB_42 NODE_101582_length_3501_cov_12.759929_Sandtown_B, whole genome shotgun sequence 3,501

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory