fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAQUQS01 sp028715965 STD1_55

Genome identifier: GCA_028715965.1

NCBI assembly name: ASM2871596v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, Tantalellales, Tantalellaceae, JAQUQS01, JAQUQS01 sp028715965

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 71

Genes: 1,771 Protein-coding: 1,712 RNAs: 50 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUQS010000001.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_86_length_242331_cov_7.045338_Sandtown_D1, whole genome shotgun sequence 242,331
JAQUQS010000002.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_108_length_214570_cov_6.594620_Sandtown_D1, whole genome shotgun sequence 214,570
JAQUQS010000003.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_161_length_161293_cov_6.740131_Sandtown_D1, whole genome shotgun sequence 161,293
JAQUQS010000004.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_196_length_149366_cov_7.234021_Sandtown_D1, whole genome shotgun sequence 149,366
JAQUQS010000005.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_220_length_141851_cov_6.749767_Sandtown_D1, whole genome shotgun sequence 141,851
JAQUQS010000006.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_274_length_127804_cov_7.038002_Sandtown_D1, whole genome shotgun sequence 127,804
JAQUQS010000007.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_337_length_114095_cov_7.440378_Sandtown_D1, whole genome shotgun sequence 114,095
JAQUQS010000008.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_987_length_59785_cov_6.747930_Sandtown_D1, whole genome shotgun sequence 59,785
JAQUQS010000009.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1097_length_55710_cov_7.251228_Sandtown_D1, whole genome shotgun sequence 55,710
JAQUQS010000010.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1189_length_53114_cov_6.398645_Sandtown_D1, whole genome shotgun sequence 53,114
JAQUQS010000011.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1212_length_52407_cov_7.128749_Sandtown_D1, whole genome shotgun sequence 52,407
JAQUQS010000012.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1269_length_51078_cov_6.592118_Sandtown_D1, whole genome shotgun sequence 51,078
JAQUQS010000013.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1315_length_50214_cov_8.114181_Sandtown_D1, whole genome shotgun sequence 50,214
JAQUQS010000014.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1566_length_45335_cov_6.552004_Sandtown_D1, whole genome shotgun sequence 45,335
JAQUQS010000015.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_1627_length_44287_cov_6.657903_Sandtown_D1, whole genome shotgun sequence 44,287
JAQUQS010000016.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_2083_length_38300_cov_6.402929_Sandtown_D1, whole genome shotgun sequence 38,300
JAQUQS010000017.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_2370_length_35319_cov_6.856132_Sandtown_D1, whole genome shotgun sequence 35,319
JAQUQS010000018.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_2445_length_34542_cov_7.137556_Sandtown_D1, whole genome shotgun sequence 34,542
JAQUQS010000019.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_2905_length_31227_cov_7.175370_Sandtown_D1, whole genome shotgun sequence 31,227
JAQUQS010000020.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_3142_length_29944_cov_6.692659_Sandtown_D1, whole genome shotgun sequence 29,944
JAQUQS010000021.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_3301_length_28966_cov_7.137522_Sandtown_D1, whole genome shotgun sequence 28,966
JAQUQS010000022.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_3828_length_26434_cov_6.912305_Sandtown_D1, whole genome shotgun sequence 26,434
JAQUQS010000023.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_4843_length_22951_cov_6.029180_Sandtown_D1, whole genome shotgun sequence 22,951
JAQUQS010000024.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_6160_length_19869_cov_6.234931_Sandtown_D1, whole genome shotgun sequence 19,869
JAQUQS010000025.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_7190_length_18048_cov_2.233916_Sandtown_D1, whole genome shotgun sequence 18,048
JAQUQS010000026.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_9106_length_15676_cov_6.813107_Sandtown_D1, whole genome shotgun sequence 15,676
JAQUQS010000027.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_9217_length_15558_cov_6.447152_Sandtown_D1, whole genome shotgun sequence 15,558
JAQUQS010000028.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_9667_length_15157_cov_6.853027_Sandtown_D1, whole genome shotgun sequence 15,157
JAQUQS010000029.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_11840_length_13472_cov_6.440764_Sandtown_D1, whole genome shotgun sequence 13,472
JAQUQS010000030.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_12538_length_13017_cov_4.708379_Sandtown_D1, whole genome shotgun sequence 13,017
JAQUQS010000031.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_13137_length_12677_cov_6.841912_Sandtown_D1, whole genome shotgun sequence 12,677
JAQUQS010000032.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_16338_length_11109_cov_7.139410_Sandtown_D1, whole genome shotgun sequence 11,109
JAQUQS010000033.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_16744_length_10967_cov_8.240775_Sandtown_D1, whole genome shotgun sequence 10,967
JAQUQS010000034.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_17537_length_10674_cov_5.094245_Sandtown_D1, whole genome shotgun sequence 10,674
JAQUQS010000035.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_18670_length_10295_cov_8.304288_Sandtown_D1, whole genome shotgun sequence 10,295
JAQUQS010000036.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_21377_length_9503_cov_2.599296_Sandtown_D1, whole genome shotgun sequence 9,503
JAQUQS010000037.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_23127_length_9076_cov_2.453235_Sandtown_D1, whole genome shotgun sequence 9,076
JAQUQS010000038.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_28124_length_8119_cov_10.943318_Sandtown_D1, whole genome shotgun sequence 8,119
JAQUQS010000039.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_33644_length_7298_cov_6.313764_Sandtown_D1, whole genome shotgun sequence 7,298
JAQUQS010000040.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_36312_length_6981_cov_6.427779_Sandtown_D1, whole genome shotgun sequence 6,981
JAQUQS010000041.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_39775_length_6629_cov_2.560135_Sandtown_D1, whole genome shotgun sequence 6,629
JAQUQS010000042.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_43565_length_6300_cov_1.832334_Sandtown_D1, whole genome shotgun sequence 6,300
JAQUQS010000043.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_51118_length_5750_cov_2.482661_Sandtown_D1, whole genome shotgun sequence 5,750
JAQUQS010000044.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_56629_length_5431_cov_2.500566_Sandtown_D1, whole genome shotgun sequence 5,431
JAQUQS010000045.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_56858_length_5419_cov_5.442555_Sandtown_D1, whole genome shotgun sequence 5,419
JAQUQS010000046.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_60944_length_5214_cov_6.857087_Sandtown_D1, whole genome shotgun sequence 5,214
JAQUQS010000047.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_62472_length_5144_cov_2.822205_Sandtown_D1, whole genome shotgun sequence 5,144
JAQUQS010000048.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_66739_length_4958_cov_7.098323_Sandtown_D1, whole genome shotgun sequence 4,958
JAQUQS010000049.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_74944_length_4657_cov_2.379249_Sandtown_D1, whole genome shotgun sequence 4,657
JAQUQS010000050.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_76688_length_4598_cov_2.164840_Sandtown_D1, whole genome shotgun sequence 4,598
JAQUQS010000051.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_77774_length_4562_cov_4.262683_Sandtown_D1, whole genome shotgun sequence 4,562
JAQUQS010000052.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_83071_length_4398_cov_2.197378_Sandtown_D1, whole genome shotgun sequence 4,398
JAQUQS010000053.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_88682_length_4242_cov_2.545079_Sandtown_D1, whole genome shotgun sequence 4,242
JAQUQS010000054.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_88776_length_4239_cov_3.093628_Sandtown_D1, whole genome shotgun sequence 4,239
JAQUQS010000055.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_89707_length_4215_cov_3.143591_Sandtown_D1, whole genome shotgun sequence 4,215
JAQUQS010000056.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_135116_length_3374_cov_2.846936_Sandtown_D1, whole genome shotgun sequence 3,374
JAQUQS010000057.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_149546_length_3196_cov_4.485826_Sandtown_D1, whole genome shotgun sequence 3,196
JAQUQS010000058.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_151498_length_3174_cov_7.610765_Sandtown_D1, whole genome shotgun sequence 3,174
JAQUQS010000059.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_157270_length_3113_cov_2.387140_Sandtown_D1, whole genome shotgun sequence 3,113
JAQUQS010000060.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_159446_length_3090_cov_5.051637_Sandtown_D1, whole genome shotgun sequence 3,090
JAQUQS010000061.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_167910_length_3007_cov_2.792708_Sandtown_D1, whole genome shotgun sequence 3,007
JAQUQS010000062.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_171393_length_2976_cov_5.033696_Sandtown_D1, whole genome shotgun sequence 2,976
JAQUQS010000063.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_180606_length_2896_cov_2.908631_Sandtown_D1, whole genome shotgun sequence 2,896
JAQUQS010000064.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_189573_length_2823_cov_5.991098_Sandtown_D1, whole genome shotgun sequence 2,823
JAQUQS010000065.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_193115_length_2795_cov_3.835082_Sandtown_D1, whole genome shotgun sequence 2,795
JAQUQS010000066.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_197590_length_2761_cov_3.178436_Sandtown_D1, whole genome shotgun sequence 2,761
JAQUQS010000067.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_202300_length_2727_cov_5.290769_Sandtown_D1, whole genome shotgun sequence 2,727
JAQUQS010000068.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_216253_length_2633_cov_3.381085_Sandtown_D1, whole genome shotgun sequence 2,633
JAQUQS010000069.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_216396_length_2632_cov_6.060679_Sandtown_D1, whole genome shotgun sequence 2,632
JAQUQS010000070.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_231969_length_2537_cov_5.873029_Sandtown_D1, whole genome shotgun sequence 2,537
JAQUQS010000071.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_55 NODE_236091_length_2514_cov_2.256808_Sandtown_D1, whole genome shotgun sequence 2,514

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory