fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAQTSV01 sp028711115 STD1_24

Genome identifier: GCA_028716625.1

NCBI assembly name: ASM2871662v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, Velamenicoccales, JABMQK01, JAQTSV01, JAQTSV01 sp028711115

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 72

Genes: 1,958 Protein-coding: 1,895 RNAs: 56 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUPK010000001.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_2_length_983760_cov_6.673974_Sandtown_D1, whole genome shotgun sequence 983,760
JAQUPK010000002.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_112_length_211764_cov_6.522612_Sandtown_D1, whole genome shotgun sequence 211,764
JAQUPK010000003.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_133_length_185725_cov_6.818172_Sandtown_D1, whole genome shotgun sequence 185,725
JAQUPK010000004.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_506_length_89140_cov_6.912653_Sandtown_D1, whole genome shotgun sequence 89,140
JAQUPK010000005.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_1628_length_44273_cov_6.579781_Sandtown_D1, whole genome shotgun sequence 44,273
JAQUPK010000006.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_1884_length_40800_cov_7.473803_Sandtown_D1, whole genome shotgun sequence 40,800
JAQUPK010000007.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_6143_length_19901_cov_4.463184_Sandtown_D1, whole genome shotgun sequence 19,901
JAQUPK010000008.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_9008_length_15781_cov_5.025808_Sandtown_D1, whole genome shotgun sequence 15,781
JAQUPK010000009.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_10287_length_14648_cov_4.349976_Sandtown_D1, whole genome shotgun sequence 14,648
JAQUPK010000010.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_11756_length_13523_cov_7.989997_Sandtown_D1, whole genome shotgun sequence 13,523
JAQUPK010000011.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_18463_length_10368_cov_2.789474_Sandtown_D1, whole genome shotgun sequence 10,368
JAQUPK010000012.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_18849_length_10235_cov_6.765532_Sandtown_D1, whole genome shotgun sequence 10,235
JAQUPK010000013.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_21291_length_9527_cov_3.139787_Sandtown_D1, whole genome shotgun sequence 9,527
JAQUPK010000014.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_21604_length_9443_cov_2.879669_Sandtown_D1, whole genome shotgun sequence 9,443
JAQUPK010000015.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_24071_length_8866_cov_2.535187_Sandtown_D1, whole genome shotgun sequence 8,866
JAQUPK010000016.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_24879_length_8699_cov_2.825945_Sandtown_D1, whole genome shotgun sequence 8,699
JAQUPK010000017.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_29260_length_7929_cov_3.557549_Sandtown_D1, whole genome shotgun sequence 7,929
JAQUPK010000018.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_32346_length_7472_cov_2.093125_Sandtown_D1, whole genome shotgun sequence 7,472
JAQUPK010000019.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_33038_length_7377_cov_10.410621_Sandtown_D1, whole genome shotgun sequence 7,377
JAQUPK010000020.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_33170_length_7358_cov_6.196515_Sandtown_D1, whole genome shotgun sequence 7,358
JAQUPK010000021.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_34146_length_7233_cov_7.458908_Sandtown_D1, whole genome shotgun sequence 7,233
JAQUPK010000022.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_36137_length_7002_cov_2.425600_Sandtown_D1, whole genome shotgun sequence 7,002
JAQUPK010000023.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_38956_length_6705_cov_4.815749_Sandtown_D1, whole genome shotgun sequence 6,705
JAQUPK010000024.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_39821_length_6624_cov_4.191011_Sandtown_D1, whole genome shotgun sequence 6,624
JAQUPK010000025.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_43583_length_6298_cov_2.644304_Sandtown_D1, whole genome shotgun sequence 6,298
JAQUPK010000026.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_44548_length_6218_cov_3.241996_Sandtown_D1, whole genome shotgun sequence 6,218
JAQUPK010000027.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_48510_length_5927_cov_3.705517_Sandtown_D1, whole genome shotgun sequence 5,927
JAQUPK010000028.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_49251_length_5875_cov_9.289144_Sandtown_D1, whole genome shotgun sequence 5,875
JAQUPK010000029.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_52238_length_5685_cov_1.503778_Sandtown_D1, whole genome shotgun sequence 5,685
JAQUPK010000030.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_52641_length_5662_cov_4.161518_Sandtown_D1, whole genome shotgun sequence 5,662
JAQUPK010000031.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_53261_length_5624_cov_3.898308_Sandtown_D1, whole genome shotgun sequence 5,624
JAQUPK010000032.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_53597_length_5604_cov_5.174000_Sandtown_D1, whole genome shotgun sequence 5,604
JAQUPK010000033.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_63255_length_5108_cov_2.339490_Sandtown_D1, whole genome shotgun sequence 5,108
JAQUPK010000034.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_63698_length_5088_cov_4.536384_Sandtown_D1, whole genome shotgun sequence 5,088
JAQUPK010000035.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_66168_length_4983_cov_7.776771_Sandtown_D1, whole genome shotgun sequence 4,983
JAQUPK010000036.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_66864_length_4953_cov_8.871736_Sandtown_D1, whole genome shotgun sequence 4,953
JAQUPK010000037.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_75106_length_4652_cov_2.156464_Sandtown_D1, whole genome shotgun sequence 4,652
JAQUPK010000038.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_85809_length_4320_cov_2.770808_Sandtown_D1, whole genome shotgun sequence 4,320
JAQUPK010000039.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_88478_length_4248_cov_1.606892_Sandtown_D1, whole genome shotgun sequence 4,248
JAQUPK010000040.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_93254_length_4128_cov_2.336166_Sandtown_D1, whole genome shotgun sequence 4,128
JAQUPK010000041.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_96430_length_4053_cov_10.181100_Sandtown_D1, whole genome shotgun sequence 4,053
JAQUPK010000042.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_98678_length_4002_cov_2.676387_Sandtown_D1, whole genome shotgun sequence 4,002
JAQUPK010000043.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_105593_length_3858_cov_5.730635_Sandtown_D1, whole genome shotgun sequence 3,858
JAQUPK010000044.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_109811_length_3775_cov_2.580044_Sandtown_D1, whole genome shotgun sequence 3,775
JAQUPK010000045.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_117674_length_3634_cov_2.116339_Sandtown_D1, whole genome shotgun sequence 3,634
JAQUPK010000046.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_123077_length_3549_cov_7.823203_Sandtown_D1, whole genome shotgun sequence 3,549
JAQUPK010000047.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_125282_length_3516_cov_3.098259_Sandtown_D1, whole genome shotgun sequence 3,516
JAQUPK010000048.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_140134_length_3310_cov_2.026076_Sandtown_D1, whole genome shotgun sequence 3,310
JAQUPK010000049.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_145429_length_3244_cov_6.157844_Sandtown_D1, whole genome shotgun sequence 3,244
JAQUPK010000050.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_148796_length_3205_cov_8.010396_Sandtown_D1, whole genome shotgun sequence 3,205
JAQUPK010000051.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_153454_length_3153_cov_2.208857_Sandtown_D1, whole genome shotgun sequence 3,153
JAQUPK010000052.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_154712_length_3139_cov_2.330345_Sandtown_D1, whole genome shotgun sequence 3,139
JAQUPK010000053.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_154826_length_3138_cov_2.213882_Sandtown_D1, whole genome shotgun sequence 3,138
JAQUPK010000054.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_159661_length_3088_cov_2.318473_Sandtown_D1, whole genome shotgun sequence 3,088
JAQUPK010000055.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_165996_length_3025_cov_3.614562_Sandtown_D1, whole genome shotgun sequence 3,025
JAQUPK010000056.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_172810_length_2964_cov_1.623194_Sandtown_D1, whole genome shotgun sequence 2,964
JAQUPK010000057.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_172991_length_2962_cov_4.239506_Sandtown_D1, whole genome shotgun sequence 2,962
JAQUPK010000058.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_173224_length_2960_cov_2.782563_Sandtown_D1, whole genome shotgun sequence 2,960
JAQUPK010000059.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_177031_length_2927_cov_2.004286_Sandtown_D1, whole genome shotgun sequence 2,927
JAQUPK010000060.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_180086_length_2900_cov_8.943022_Sandtown_D1, whole genome shotgun sequence 2,900
JAQUPK010000061.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_181448_length_2889_cov_3.005431_Sandtown_D1, whole genome shotgun sequence 2,889
JAQUPK010000062.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_186225_length_2850_cov_1.973926_Sandtown_D1, whole genome shotgun sequence 2,850
JAQUPK010000063.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_191959_length_2804_cov_7.174823_Sandtown_D1, whole genome shotgun sequence 2,804
JAQUPK010000064.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_194650_length_2784_cov_1.462175_Sandtown_D1, whole genome shotgun sequence 2,784
JAQUPK010000065.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_207110_length_2694_cov_2.300351_Sandtown_D1, whole genome shotgun sequence 2,694
JAQUPK010000066.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_213255_length_2653_cov_2.514648_Sandtown_D1, whole genome shotgun sequence 2,653
JAQUPK010000067.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_217703_length_2624_cov_2.114137_Sandtown_D1, whole genome shotgun sequence 2,624
JAQUPK010000068.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_219103_length_2615_cov_2.596463_Sandtown_D1, whole genome shotgun sequence 2,615
JAQUPK010000069.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_221788_length_2598_cov_3.324160_Sandtown_D1, whole genome shotgun sequence 2,598
JAQUPK010000070.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_228704_length_2556_cov_7.006999_Sandtown_D1, whole genome shotgun sequence 2,556
JAQUPK010000071.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_231095_length_2543_cov_1.036424_Sandtown_D1, whole genome shotgun sequence 2,543
JAQUPK010000072.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_24 NODE_234281_length_2524_cov_3.661243_Sandtown_D1, whole genome shotgun sequence 2,524

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory