fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA1063 sp002316275 STD1_206

Genome identifier: GCA_028717085.1

NCBI assembly name: ASM2871708v1

GTDB taxonomy: Bacteria, WOR-3, Hydrothermia, UBA1063, UBA1063, UBA1063, UBA1063 sp002316275

NCBI taxonomy: Bacteria, Candidatus Hydrothermota, Candidatus Hydrothermia

Scaffolds: 99

Genes: 1,444 Protein-coding: 1,393 RNAs: 45 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUOS010000001.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_878_length_64380_cov_4.412121_Sandtown_D1, whole genome shotgun sequence 64,380
JAQUOS010000002.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_957_length_61338_cov_3.995164_Sandtown_D1, whole genome shotgun sequence 61,338
JAQUOS010000003.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_1072_length_56368_cov_4.292242_Sandtown_D1, whole genome shotgun sequence 56,368
JAQUOS010000004.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_1156_length_54147_cov_4.372640_Sandtown_D1, whole genome shotgun sequence 54,147
JAQUOS010000005.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_1809_length_41678_cov_3.860172_Sandtown_D1, whole genome shotgun sequence 41,678
JAQUOS010000006.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_2140_length_37674_cov_4.024955_Sandtown_D1, whole genome shotgun sequence 37,674
JAQUOS010000007.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_2257_length_36363_cov_4.092229_Sandtown_D1, whole genome shotgun sequence 36,363
JAQUOS010000008.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_2372_length_35285_cov_3.989476_Sandtown_D1, whole genome shotgun sequence 35,285
JAQUOS010000009.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3362_length_28629_cov_3.828994_Sandtown_D1, whole genome shotgun sequence 28,629
JAQUOS010000010.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3414_length_28377_cov_4.108956_Sandtown_D1, whole genome shotgun sequence 28,377
JAQUOS010000011.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3442_length_28252_cov_4.241564_Sandtown_D1, whole genome shotgun sequence 28,252
JAQUOS010000012.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3758_length_26756_cov_4.151264_Sandtown_D1, whole genome shotgun sequence 26,756
JAQUOS010000013.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3815_length_26467_cov_4.430942_Sandtown_D1, whole genome shotgun sequence 26,467
JAQUOS010000014.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3878_length_26243_cov_3.973656_Sandtown_D1, whole genome shotgun sequence 26,243
JAQUOS010000015.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3930_length_26042_cov_4.542852_Sandtown_D1, whole genome shotgun sequence 26,042
JAQUOS010000016.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_3983_length_25846_cov_4.067926_Sandtown_D1, whole genome shotgun sequence 25,846
JAQUOS010000017.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4007_length_25765_cov_3.768586_Sandtown_D1, whole genome shotgun sequence 25,765
JAQUOS010000018.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4130_length_25301_cov_4.276039_Sandtown_D1, whole genome shotgun sequence 25,301
JAQUOS010000019.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4206_length_25045_cov_3.818284_Sandtown_D1, whole genome shotgun sequence 25,045
JAQUOS010000020.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4245_length_24901_cov_3.762897_Sandtown_D1, whole genome shotgun sequence 24,901
JAQUOS010000021.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4345_length_24580_cov_4.037051_Sandtown_D1, whole genome shotgun sequence 24,580
JAQUOS010000022.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4398_length_24413_cov_4.060940_Sandtown_D1, whole genome shotgun sequence 24,413
JAQUOS010000023.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4416_length_24372_cov_4.132728_Sandtown_D1, whole genome shotgun sequence 24,372
JAQUOS010000024.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4806_length_23050_cov_4.036383_Sandtown_D1, whole genome shotgun sequence 23,050
JAQUOS010000025.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_4902_length_22775_cov_4.093827_Sandtown_D1, whole genome shotgun sequence 22,775
JAQUOS010000026.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_5309_length_21732_cov_4.373895_Sandtown_D1, whole genome shotgun sequence 21,732
JAQUOS010000027.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_5941_length_20276_cov_3.786242_Sandtown_D1, whole genome shotgun sequence 20,276
JAQUOS010000028.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_5966_length_20240_cov_4.223338_Sandtown_D1, whole genome shotgun sequence 20,240
JAQUOS010000029.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_7191_length_18046_cov_4.005469_Sandtown_D1, whole genome shotgun sequence 18,046
JAQUOS010000030.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_7729_length_17296_cov_3.698992_Sandtown_D1, whole genome shotgun sequence 17,296
JAQUOS010000031.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_7730_length_17295_cov_4.044560_Sandtown_D1, whole genome shotgun sequence 17,295
JAQUOS010000032.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_8936_length_15850_cov_3.925460_Sandtown_D1, whole genome shotgun sequence 15,850
JAQUOS010000033.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_9374_length_15417_cov_4.198365_Sandtown_D1, whole genome shotgun sequence 15,417
JAQUOS010000034.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_9689_length_15136_cov_4.341195_Sandtown_D1, whole genome shotgun sequence 15,136
JAQUOS010000035.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_9912_length_14943_cov_4.231304_Sandtown_D1, whole genome shotgun sequence 14,943
JAQUOS010000036.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_10741_length_14299_cov_4.188752_Sandtown_D1, whole genome shotgun sequence 14,299
JAQUOS010000037.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_11184_length_13954_cov_3.910682_Sandtown_D1, whole genome shotgun sequence 13,954
JAQUOS010000038.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_11437_length_13771_cov_4.286353_Sandtown_D1, whole genome shotgun sequence 13,771
JAQUOS010000039.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_11498_length_13722_cov_4.455756_Sandtown_D1, whole genome shotgun sequence 13,722
JAQUOS010000040.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_12106_length_13307_cov_3.637481_Sandtown_D1, whole genome shotgun sequence 13,307
JAQUOS010000041.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_12617_length_12970_cov_3.852994_Sandtown_D1, whole genome shotgun sequence 12,970
JAQUOS010000042.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_13619_length_12405_cov_3.884916_Sandtown_D1, whole genome shotgun sequence 12,405
JAQUOS010000043.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_13642_length_12395_cov_3.809341_Sandtown_D1, whole genome shotgun sequence 12,395
JAQUOS010000044.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_13664_length_12385_cov_3.808860_Sandtown_D1, whole genome shotgun sequence 12,385
JAQUOS010000045.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_14360_length_12022_cov_3.695082_Sandtown_D1, whole genome shotgun sequence 12,022
JAQUOS010000046.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_14434_length_11989_cov_3.394284_Sandtown_D1, whole genome shotgun sequence 11,989
JAQUOS010000047.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_15725_length_11366_cov_2.951686_Sandtown_D1, whole genome shotgun sequence 11,366
JAQUOS010000048.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_15805_length_11330_cov_3.225475_Sandtown_D1, whole genome shotgun sequence 11,330
JAQUOS010000049.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_16049_length_11223_cov_3.693583_Sandtown_D1, whole genome shotgun sequence 11,223
JAQUOS010000050.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_16411_length_11081_cov_4.156290_Sandtown_D1, whole genome shotgun sequence 11,081
JAQUOS010000051.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_17982_length_10524_cov_4.179571_Sandtown_D1, whole genome shotgun sequence 10,524
JAQUOS010000052.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_18299_length_10420_cov_3.529389_Sandtown_D1, whole genome shotgun sequence 10,420
JAQUOS010000053.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_18998_length_10196_cov_3.742973_Sandtown_D1, whole genome shotgun sequence 10,196
JAQUOS010000054.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_24616_length_8753_cov_4.562717_Sandtown_D1, whole genome shotgun sequence 8,753
JAQUOS010000055.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_26213_length_8444_cov_4.104485_Sandtown_D1, whole genome shotgun sequence 8,444
JAQUOS010000056.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_27172_length_8281_cov_3.913907_Sandtown_D1, whole genome shotgun sequence 8,281
JAQUOS010000057.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_27586_length_8210_cov_3.983051_Sandtown_D1, whole genome shotgun sequence 8,210
JAQUOS010000058.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_27988_length_8141_cov_3.816696_Sandtown_D1, whole genome shotgun sequence 8,141
JAQUOS010000059.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_29419_length_7904_cov_3.969011_Sandtown_D1, whole genome shotgun sequence 7,904
JAQUOS010000060.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_30629_length_7715_cov_3.954402_Sandtown_D1, whole genome shotgun sequence 7,715
JAQUOS010000061.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_30769_length_7691_cov_3.838181_Sandtown_D1, whole genome shotgun sequence 7,691
JAQUOS010000062.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_35070_length_7125_cov_4.134038_Sandtown_D1, whole genome shotgun sequence 7,125
JAQUOS010000063.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_35158_length_7115_cov_3.515312_Sandtown_D1, whole genome shotgun sequence 7,115
JAQUOS010000064.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_35406_length_7086_cov_3.739043_Sandtown_D1, whole genome shotgun sequence 7,086
JAQUOS010000065.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_42010_length_6427_cov_4.312540_Sandtown_D1, whole genome shotgun sequence 6,427
JAQUOS010000066.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_42509_length_6385_cov_3.169863_Sandtown_D1, whole genome shotgun sequence 6,385
JAQUOS010000067.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_45220_length_6166_cov_4.574433_Sandtown_D1, whole genome shotgun sequence 6,166
JAQUOS010000068.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_51887_length_5704_cov_3.603371_Sandtown_D1, whole genome shotgun sequence 5,704
JAQUOS010000069.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_53517_length_5609_cov_3.543597_Sandtown_D1, whole genome shotgun sequence 5,609
JAQUOS010000070.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_53931_length_5585_cov_4.180835_Sandtown_D1, whole genome shotgun sequence 5,585
JAQUOS010000071.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_53983_length_5582_cov_3.471861_Sandtown_D1, whole genome shotgun sequence 5,582
JAQUOS010000072.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_54412_length_5556_cov_4.157856_Sandtown_D1, whole genome shotgun sequence 5,556
JAQUOS010000073.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_57621_length_5379_cov_3.895468_Sandtown_D1, whole genome shotgun sequence 5,379
JAQUOS010000074.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_57753_length_5372_cov_3.781506_Sandtown_D1, whole genome shotgun sequence 5,372
JAQUOS010000075.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_62486_length_5143_cov_4.288676_Sandtown_D1, whole genome shotgun sequence 5,143
JAQUOS010000076.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_69290_length_4861_cov_3.771441_Sandtown_D1, whole genome shotgun sequence 4,861
JAQUOS010000077.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_72361_length_4745_cov_4.323733_Sandtown_D1, whole genome shotgun sequence 4,745
JAQUOS010000078.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_76481_length_4604_cov_3.902390_Sandtown_D1, whole genome shotgun sequence 4,604
JAQUOS010000079.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_79700_length_4501_cov_3.827618_Sandtown_D1, whole genome shotgun sequence 4,501
JAQUOS010000080.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_86295_length_4306_cov_4.413735_Sandtown_D1, whole genome shotgun sequence 4,306
JAQUOS010000081.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_87601_length_4271_cov_4.141168_Sandtown_D1, whole genome shotgun sequence 4,271
JAQUOS010000082.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_90055_length_4206_cov_4.276293_Sandtown_D1, whole genome shotgun sequence 4,206
JAQUOS010000083.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_98331_length_4010_cov_3.873809_Sandtown_D1, whole genome shotgun sequence 4,010
JAQUOS010000084.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_99410_length_3986_cov_3.381446_Sandtown_D1, whole genome shotgun sequence 3,986
JAQUOS010000085.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_105700_length_3856_cov_3.253955_Sandtown_D1, whole genome shotgun sequence 3,856
JAQUOS010000086.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_113414_length_3709_cov_3.942211_Sandtown_D1, whole genome shotgun sequence 3,709
JAQUOS010000087.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_118135_length_3626_cov_3.285510_Sandtown_D1, whole genome shotgun sequence 3,626
JAQUOS010000088.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_123010_length_3550_cov_4.782939_Sandtown_D1, whole genome shotgun sequence 3,550
JAQUOS010000089.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_126255_length_3501_cov_4.039419_Sandtown_D1, whole genome shotgun sequence 3,501
JAQUOS010000090.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_142549_length_3279_cov_3.901332_Sandtown_D1, whole genome shotgun sequence 3,279
JAQUOS010000091.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_144332_length_3257_cov_4.338339_Sandtown_D1, whole genome shotgun sequence 3,257
JAQUOS010000092.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_161422_length_3070_cov_3.572885_Sandtown_D1, whole genome shotgun sequence 3,070
JAQUOS010000093.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_162034_length_3064_cov_2.400068_Sandtown_D1, whole genome shotgun sequence 3,064
JAQUOS010000094.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_171293_length_2977_cov_3.799649_Sandtown_D1, whole genome shotgun sequence 2,977
JAQUOS010000095.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_183968_length_2868_cov_3.813572_Sandtown_D1, whole genome shotgun sequence 2,868
JAQUOS010000096.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_198214_length_2757_cov_1.852471_Sandtown_D1, whole genome shotgun sequence 2,757
JAQUOS010000097.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_199785_length_2745_cov_2.512223_Sandtown_D1, whole genome shotgun sequence 2,745
JAQUOS010000098.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_210673_length_2670_cov_3.502556_Sandtown_D1, whole genome shotgun sequence 2,670
JAQUOS010000099.1 MAG: Candidatus Hydrothermia bacterium isolate STD1_206 NODE_213658_length_2650_cov_3.292905_Sandtown_D1, whole genome shotgun sequence 2,650

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory