fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAQUNK01 sp028717645 STD1_176

Genome identifier: GCA_028717645.1

NCBI assembly name: ASM2871764v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, Gygaellales, JAMWDD01, JAQUNK01, JAQUNK01 sp028717645

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 58

Genes: 1,555 Protein-coding: 1,494 RNAs: 53 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUNK010000001.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_239_length_134972_cov_7.246698_Sandtown_D1, whole genome shotgun sequence 134,972
JAQUNK010000002.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_529_length_86855_cov_6.879382_Sandtown_D1, whole genome shotgun sequence 86,855
JAQUNK010000003.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_540_length_85947_cov_6.628327_Sandtown_D1, whole genome shotgun sequence 85,947
JAQUNK010000004.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_594_length_80738_cov_6.873615_Sandtown_D1, whole genome shotgun sequence 80,738
JAQUNK010000005.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_890_length_63731_cov_6.891453_Sandtown_D1, whole genome shotgun sequence 63,731
JAQUNK010000006.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1053_length_56993_cov_6.550593_Sandtown_D1, whole genome shotgun sequence 56,993
JAQUNK010000007.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1184_length_53264_cov_6.294710_Sandtown_D1, whole genome shotgun sequence 53,264
JAQUNK010000008.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1397_length_48450_cov_6.952466_Sandtown_D1, whole genome shotgun sequence 48,450
JAQUNK010000009.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1532_length_45873_cov_16.656189_Sandtown_D1, whole genome shotgun sequence 45,873
JAQUNK010000010.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1669_length_43605_cov_6.770022_Sandtown_D1, whole genome shotgun sequence 43,605
JAQUNK010000011.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_1875_length_40880_cov_6.817044_Sandtown_D1, whole genome shotgun sequence 40,880
JAQUNK010000012.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_2119_length_37904_cov_7.153427_Sandtown_D1, whole genome shotgun sequence 37,904
JAQUNK010000013.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_2215_length_36757_cov_7.152170_Sandtown_D1, whole genome shotgun sequence 36,757
JAQUNK010000014.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_2317_length_35865_cov_6.151463_Sandtown_D1, whole genome shotgun sequence 35,865
JAQUNK010000015.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_2363_length_35399_cov_6.951888_Sandtown_D1, whole genome shotgun sequence 35,399
JAQUNK010000016.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_2987_length_30820_cov_6.744307_Sandtown_D1, whole genome shotgun sequence 30,820
JAQUNK010000017.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_3061_length_30372_cov_7.378377_Sandtown_D1, whole genome shotgun sequence 30,372
JAQUNK010000018.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_3146_length_29927_cov_7.069698_Sandtown_D1, whole genome shotgun sequence 29,927
JAQUNK010000019.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_3932_length_26037_cov_6.888576_Sandtown_D1, whole genome shotgun sequence 26,037
JAQUNK010000020.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_4079_length_25509_cov_6.367820_Sandtown_D1, whole genome shotgun sequence 25,509
JAQUNK010000021.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_4487_length_24027_cov_7.161757_Sandtown_D1, whole genome shotgun sequence 24,027
JAQUNK010000022.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_4979_length_22580_cov_6.101590_Sandtown_D1, whole genome shotgun sequence 22,580
JAQUNK010000023.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_5540_length_21182_cov_6.711660_Sandtown_D1, whole genome shotgun sequence 21,182
JAQUNK010000024.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_6267_length_19661_cov_6.606788_Sandtown_D1, whole genome shotgun sequence 19,661
JAQUNK010000025.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_6863_length_18577_cov_6.881897_Sandtown_D1, whole genome shotgun sequence 18,577
JAQUNK010000026.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_7645_length_17418_cov_6.198832_Sandtown_D1, whole genome shotgun sequence 17,418
JAQUNK010000027.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_8411_length_16440_cov_6.632624_Sandtown_D1, whole genome shotgun sequence 16,440
JAQUNK010000028.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_8658_length_16145_cov_6.240854_Sandtown_D1, whole genome shotgun sequence 16,145
JAQUNK010000029.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_9366_length_15420_cov_6.380043_Sandtown_D1, whole genome shotgun sequence 15,420
JAQUNK010000030.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_11390_length_13803_cov_7.159257_Sandtown_D1, whole genome shotgun sequence 13,803
JAQUNK010000031.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_12598_length_12980_cov_7.377733_Sandtown_D1, whole genome shotgun sequence 12,980
JAQUNK010000032.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_14289_length_12057_cov_7.377955_Sandtown_D1, whole genome shotgun sequence 12,057
JAQUNK010000033.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_14292_length_12056_cov_6.325677_Sandtown_D1, whole genome shotgun sequence 12,056
JAQUNK010000034.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_15671_length_11387_cov_6.249290_Sandtown_D1, whole genome shotgun sequence 11,387
JAQUNK010000035.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_17667_length_10633_cov_6.590139_Sandtown_D1, whole genome shotgun sequence 10,633
JAQUNK010000036.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_17970_length_10530_cov_6.284149_Sandtown_D1, whole genome shotgun sequence 10,530
JAQUNK010000037.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_19490_length_10045_cov_5.928715_Sandtown_D1, whole genome shotgun sequence 10,045
JAQUNK010000038.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_19597_length_10016_cov_7.303266_Sandtown_D1, whole genome shotgun sequence 10,016
JAQUNK010000039.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_20924_length_9623_cov_6.175864_Sandtown_D1, whole genome shotgun sequence 9,623
JAQUNK010000040.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_22698_length_9167_cov_6.681527_Sandtown_D1, whole genome shotgun sequence 9,167
JAQUNK010000041.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_24340_length_8807_cov_6.591014_Sandtown_D1, whole genome shotgun sequence 8,807
JAQUNK010000042.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_24900_length_8695_cov_6.310924_Sandtown_D1, whole genome shotgun sequence 8,695
JAQUNK010000043.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_30731_length_7696_cov_7.726780_Sandtown_D1, whole genome shotgun sequence 7,696
JAQUNK010000044.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_31021_length_7655_cov_7.118358_Sandtown_D1, whole genome shotgun sequence 7,655
JAQUNK010000045.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_33629_length_7300_cov_5.780427_Sandtown_D1, whole genome shotgun sequence 7,300
JAQUNK010000046.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_34090_length_7239_cov_7.322835_Sandtown_D1, whole genome shotgun sequence 7,239
JAQUNK010000047.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_35812_length_7040_cov_6.468393_Sandtown_D1, whole genome shotgun sequence 7,040
JAQUNK010000048.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_35902_length_7028_cov_6.487031_Sandtown_D1, whole genome shotgun sequence 7,028
JAQUNK010000049.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_39464_length_6660_cov_5.802694_Sandtown_D1, whole genome shotgun sequence 6,660
JAQUNK010000050.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_40197_length_6590_cov_7.132910_Sandtown_D1, whole genome shotgun sequence 6,590
JAQUNK010000051.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_41368_length_6482_cov_6.143824_Sandtown_D1, whole genome shotgun sequence 6,482
JAQUNK010000052.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_47232_length_6019_cov_6.531568_Sandtown_D1, whole genome shotgun sequence 6,019
JAQUNK010000053.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_54795_length_5532_cov_5.080666_Sandtown_D1, whole genome shotgun sequence 5,532
JAQUNK010000054.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_60862_length_5218_cov_6.049892_Sandtown_D1, whole genome shotgun sequence 5,218
JAQUNK010000055.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_71751_length_4767_cov_7.265948_Sandtown_D1, whole genome shotgun sequence 4,767
JAQUNK010000056.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_89132_length_4230_cov_5.134292_Sandtown_D1, whole genome shotgun sequence 4,230
JAQUNK010000057.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_168920_length_2998_cov_7.926855_Sandtown_D1, whole genome shotgun sequence 2,998
JAQUNK010000058.1 MAG: Candidatus Omnitrophota bacterium isolate STD1_176 NODE_177985_length_2918_cov_5.961662_Sandtown_D1, whole genome shotgun sequence 2,918

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory