fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAQUMH01 sp028718185 STD1_15

Genome identifier: GCA_028718185.1

NCBI assembly name: ASM2871818v1

GTDB taxonomy: Bacteria, Elusimicrobiota, UBA8919, UBA8919, UBA8919, JAQUMH01, JAQUMH01 sp028718185

NCBI taxonomy: Bacteria, Elusimicrobiota

Scaffolds: 27

Genes: 2,509 Protein-coding: 2,446 RNAs: 53 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQUMH010000001.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_3_length_970161_cov_8.478282_Sandtown_D1, whole genome shotgun sequence 970,161
JAQUMH010000002.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_56_length_301331_cov_8.567798_Sandtown_D1, whole genome shotgun sequence 301,331
JAQUMH010000003.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_65_length_277936_cov_9.288439_Sandtown_D1, whole genome shotgun sequence 277,936
JAQUMH010000004.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_95_length_225942_cov_7.819941_Sandtown_D1, whole genome shotgun sequence 225,942
JAQUMH010000005.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_150_length_170031_cov_9.609421_Sandtown_D1, whole genome shotgun sequence 170,031
JAQUMH010000006.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_272_length_127879_cov_9.848691_Sandtown_D1, whole genome shotgun sequence 127,879
JAQUMH010000007.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_287_length_125607_cov_8.567788_Sandtown_D1, whole genome shotgun sequence 125,607
JAQUMH010000008.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_288_length_125508_cov_9.816208_Sandtown_D1, whole genome shotgun sequence 125,508
JAQUMH010000009.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_400_length_103577_cov_7.837390_Sandtown_D1, whole genome shotgun sequence 103,577
JAQUMH010000010.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_531_length_86762_cov_8.289121_Sandtown_D1, whole genome shotgun sequence 86,762
JAQUMH010000011.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_642_length_75777_cov_8.377872_Sandtown_D1, whole genome shotgun sequence 75,777
JAQUMH010000012.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_734_length_70640_cov_8.775559_Sandtown_D1, whole genome shotgun sequence 70,640
JAQUMH010000013.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_1186_length_53191_cov_8.224898_Sandtown_D1, whole genome shotgun sequence 53,191
JAQUMH010000014.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_1587_length_44869_cov_7.944549_Sandtown_D1, whole genome shotgun sequence 44,869
JAQUMH010000015.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_1652_length_43868_cov_7.974852_Sandtown_D1, whole genome shotgun sequence 43,868
JAQUMH010000016.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_2105_length_38041_cov_8.612439_Sandtown_D1, whole genome shotgun sequence 38,041
JAQUMH010000017.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_2272_length_36215_cov_11.641404_Sandtown_D1, whole genome shotgun sequence 36,215
JAQUMH010000018.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_2290_length_36092_cov_11.851800_Sandtown_D1, whole genome shotgun sequence 36,092
JAQUMH010000019.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_4074_length_25520_cov_8.911117_Sandtown_D1, whole genome shotgun sequence 25,520
JAQUMH010000020.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_4381_length_24456_cov_9.711127_Sandtown_D1, whole genome shotgun sequence 24,456
JAQUMH010000021.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_7031_length_18301_cov_8.305381_Sandtown_D1, whole genome shotgun sequence 18,301
JAQUMH010000022.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_9419_length_15374_cov_7.821539_Sandtown_D1, whole genome shotgun sequence 15,374
JAQUMH010000023.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_13199_length_12639_cov_9.300911_Sandtown_D1, whole genome shotgun sequence 12,639
JAQUMH010000024.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_25861_length_8513_cov_9.035655_Sandtown_D1, whole genome shotgun sequence 8,513
JAQUMH010000025.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_75514_length_4637_cov_10.398004_Sandtown_D1, whole genome shotgun sequence 4,637
JAQUMH010000026.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_120374_length_3591_cov_17.502309_Sandtown_D1, whole genome shotgun sequence 3,591
JAQUMH010000027.1 MAG: Elusimicrobia bacterium isolate STD1_15 NODE_123215_length_3547_cov_16.877193_Sandtown_D1, whole genome shotgun sequence 3,547

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory