fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA1240 sp001603145 SUG1656

Genome identifier: GCA_029227075.1

NCBI assembly name: ASM2922707v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, Treponematales, Treponemataceae, UBA1240, UBA1240 sp001603145

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Spirochaetales

Scaffolds: 31

Genes: 2,939 Protein-coding: 2,873 RNAs: 57 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQXZF010000001.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_5538290, whole genome shotgun sequence 2,855
JAQXZF010000002.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_6158268, whole genome shotgun sequence 166,423
JAQXZF010000003.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_4830657, whole genome shotgun sequence 139,797
JAQXZF010000004.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_6682253, whole genome shotgun sequence 141,850
JAQXZF010000005.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_3362580, whole genome shotgun sequence 66,877
JAQXZF010000006.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_6441613, whole genome shotgun sequence 200,558
JAQXZF010000007.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_1036395, whole genome shotgun sequence 3,093
JAQXZF010000008.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_8913787, whole genome shotgun sequence 608,261
JAQXZF010000009.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_2508946, whole genome shotgun sequence 13,447
JAQXZF010000010.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_6577189, whole genome shotgun sequence 82,743
JAQXZF010000011.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_4003227, whole genome shotgun sequence 74,705
JAQXZF010000012.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_6580231, whole genome shotgun sequence 35,949
JAQXZF010000013.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_431220, whole genome shotgun sequence 3,179
JAQXZF010000014.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_2892612, whole genome shotgun sequence 4,569
JAQXZF010000015.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_1553563, whole genome shotgun sequence 3,691
JAQXZF010000016.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_4012231, whole genome shotgun sequence 113,251
JAQXZF010000017.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_2529963, whole genome shotgun sequence 251,586
JAQXZF010000018.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_3883879, whole genome shotgun sequence 256,344
JAQXZF010000019.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_3388928, whole genome shotgun sequence 315,628
JAQXZF010000020.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_2054933, whole genome shotgun sequence 7,357
JAQXZF010000021.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_5984480, whole genome shotgun sequence 2,333
JAQXZF010000022.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_4870692, whole genome shotgun sequence 11,830
JAQXZF010000023.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_8321795, whole genome shotgun sequence 44,030
JAQXZF010000024.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_5124653, whole genome shotgun sequence 26,982
JAQXZF010000025.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_8455788, whole genome shotgun sequence 480,624
JAQXZF010000026.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_4776501, whole genome shotgun sequence 189,896
JAQXZF010000027.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_7483714, whole genome shotgun sequence 2,758
JAQXZF010000028.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_2688458, whole genome shotgun sequence 2,076
JAQXZF010000029.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_8968190, whole genome shotgun sequence 2,082
JAQXZF010000030.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_5772589, whole genome shotgun sequence 37,728
JAQXZF010000031.1 MAG: Spirochaetales bacterium isolate SUG1656 k141_8116167, whole genome shotgun sequence 2,233

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory