fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAJFBM01 sp029266475 C_No_T20_C_bin.96

Genome identifier: GCA_029266475.1

NCBI assembly name: ASM2926647v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, JAJFBM01, JAJFBM01 sp029266475

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae

Scaffolds: 76

Genes: 1,610 Protein-coding: 1,610 RNAs: 0 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAQSWU010000001.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_83, whole genome shotgun sequence 136,571
JAQSWU010000002.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_182, whole genome shotgun sequence 70,403
JAQSWU010000003.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_287, whole genome shotgun sequence 103,181
JAQSWU010000004.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_290, whole genome shotgun sequence 54,491
JAQSWU010000005.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_300, whole genome shotgun sequence 53,580
JAQSWU010000006.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_311, whole genome shotgun sequence 52,573
JAQSWU010000007.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_318, whole genome shotgun sequence 54,857
JAQSWU010000008.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_390, whole genome shotgun sequence 47,935
JAQSWU010000009.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_417, whole genome shotgun sequence 46,480
JAQSWU010000010.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_437, whole genome shotgun sequence 55,205
JAQSWU010000011.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_604, whole genome shotgun sequence 126,426
JAQSWU010000012.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_623, whole genome shotgun sequence 40,583
JAQSWU010000013.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_636, whole genome shotgun sequence 41,017
JAQSWU010000014.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_824, whole genome shotgun sequence 35,169
JAQSWU010000015.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_882, whole genome shotgun sequence 50,069
JAQSWU010000016.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_901, whole genome shotgun sequence 31,071
JAQSWU010000017.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_995, whole genome shotgun sequence 29,719
JAQSWU010000018.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1009, whole genome shotgun sequence 38,412
JAQSWU010000019.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1102, whole genome shotgun sequence 27,979
JAQSWU010000020.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1171, whole genome shotgun sequence 27,035
JAQSWU010000021.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1266, whole genome shotgun sequence 26,204
JAQSWU010000022.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1350, whole genome shotgun sequence 24,779
JAQSWU010000023.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1362, whole genome shotgun sequence 51,932
JAQSWU010000024.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1423, whole genome shotgun sequence 23,985
JAQSWU010000025.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1474, whole genome shotgun sequence 43,717
JAQSWU010000026.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1497, whole genome shotgun sequence 24,203
JAQSWU010000027.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1508, whole genome shotgun sequence 42,907
JAQSWU010000028.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1724, whole genome shotgun sequence 21,245
JAQSWU010000029.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1787, whole genome shotgun sequence 29,523
JAQSWU010000030.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1789, whole genome shotgun sequence 21,793
JAQSWU010000031.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1839, whole genome shotgun sequence 20,518
JAQSWU010000032.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_1947, whole genome shotgun sequence 19,808
JAQSWU010000033.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_2130, whole genome shotgun sequence 22,981
JAQSWU010000034.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_2249, whole genome shotgun sequence 18,051
JAQSWU010000035.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_2275, whole genome shotgun sequence 17,953
JAQSWU010000036.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_2647, whole genome shotgun sequence 16,280
JAQSWU010000037.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_2917, whole genome shotgun sequence 29,774
JAQSWU010000038.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_3051, whole genome shotgun sequence 32,546
JAQSWU010000039.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_3098, whole genome shotgun sequence 15,234
JAQSWU010000040.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_3967, whole genome shotgun sequence 13,749
JAQSWU010000041.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_4269, whole genome shotgun sequence 12,141
JAQSWU010000042.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_5770, whole genome shotgun sequence 10,132
JAQSWU010000043.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_5901, whole genome shotgun sequence 10,529
JAQSWU010000044.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_6283, whole genome shotgun sequence 9,622
JAQSWU010000045.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_6289, whole genome shotgun sequence 9,619
JAQSWU010000046.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_7287, whole genome shotgun sequence 9,229
JAQSWU010000047.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_7696, whole genome shotgun sequence 9,315
JAQSWU010000048.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_7709, whole genome shotgun sequence 8,519
JAQSWU010000049.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_7770, whole genome shotgun sequence 8,482
JAQSWU010000050.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_8344, whole genome shotgun sequence 8,907
JAQSWU010000051.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_8762, whole genome shotgun sequence 7,912
JAQSWU010000052.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_8782, whole genome shotgun sequence 7,903
JAQSWU010000053.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_9336, whole genome shotgun sequence 8,799
JAQSWU010000054.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_12515, whole genome shotgun sequence 6,486
JAQSWU010000055.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_13649, whole genome shotgun sequence 6,178
JAQSWU010000056.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_13737, whole genome shotgun sequence 6,159
JAQSWU010000057.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_14558, whole genome shotgun sequence 7,107
JAQSWU010000058.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_15091, whole genome shotgun sequence 10,408
JAQSWU010000059.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_15460, whole genome shotgun sequence 5,794
JAQSWU010000060.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_15849, whole genome shotgun sequence 5,715
JAQSWU010000061.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_16077, whole genome shotgun sequence 5,673
JAQSWU010000062.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_18359, whole genome shotgun sequence 5,277
JAQSWU010000063.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_18422, whole genome shotgun sequence 5,267
JAQSWU010000064.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_20712, whole genome shotgun sequence 6,356
JAQSWU010000065.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_21545, whole genome shotgun sequence 4,848
JAQSWU010000066.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_22039, whole genome shotgun sequence 4,789
JAQSWU010000067.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_23207, whole genome shotgun sequence 4,935
JAQSWU010000068.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_23933, whole genome shotgun sequence 4,580
JAQSWU010000069.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_26781, whole genome shotgun sequence 4,317
JAQSWU010000070.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_27360, whole genome shotgun sequence 5,586
JAQSWU010000071.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_28494, whole genome shotgun sequence 4,179
JAQSWU010000072.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_29682, whole genome shotgun sequence 4,089
JAQSWU010000073.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_38127, whole genome shotgun sequence 3,590
JAQSWU010000074.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_39721, whole genome shotgun sequence 4,102
JAQSWU010000075.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_42825, whole genome shotgun sequence 3,381
JAQSWU010000076.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_C_bin.96 scaffold_57941, whole genome shotgun sequence 2,886

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory