fast.genomicscompare 6,575 genera of bacteria & archaea

 

M0040 sp029667085 IMCC39524

Genome identifier: GCA_029667085.1

NCBI assembly name: ASM2966708v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, BM103, M0040, M0040 sp029667085

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 19

Genes: 3,489 Protein-coding: 3,409 RNAs: 61 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JARUHJ010000001.1 Deltaproteobacteria bacterium IMCC39524 NODE_1_length_1218547_cov_82.525391, whole genome shotgun sequence 1,218,547
JARUHJ010000002.1 Deltaproteobacteria bacterium IMCC39524 NODE_2_length_516053_cov_82.313902, whole genome shotgun sequence 516,053
JARUHJ010000003.1 Deltaproteobacteria bacterium IMCC39524 NODE_3_length_508771_cov_82.962962, whole genome shotgun sequence 508,771
JARUHJ010000004.1 Deltaproteobacteria bacterium IMCC39524 NODE_4_length_492525_cov_82.867108, whole genome shotgun sequence 492,525
JARUHJ010000005.1 Deltaproteobacteria bacterium IMCC39524 NODE_5_length_367221_cov_82.656058, whole genome shotgun sequence 367,221
JARUHJ010000006.1 Deltaproteobacteria bacterium IMCC39524 NODE_6_length_173160_cov_82.969266, whole genome shotgun sequence 173,160
JARUHJ010000007.1 Deltaproteobacteria bacterium IMCC39524 NODE_7_length_144683_cov_83.023154, whole genome shotgun sequence 144,683
JARUHJ010000008.1 Deltaproteobacteria bacterium IMCC39524 NODE_8_length_99114_cov_82.022953, whole genome shotgun sequence 99,114
JARUHJ010000009.1 Deltaproteobacteria bacterium IMCC39524 NODE_9_length_74941_cov_82.896650, whole genome shotgun sequence 74,941
JARUHJ010000010.1 Deltaproteobacteria bacterium IMCC39524 NODE_10_length_64459_cov_82.101272, whole genome shotgun sequence 64,459
JARUHJ010000011.1 Deltaproteobacteria bacterium IMCC39524 NODE_11_length_50534_cov_78.867201, whole genome shotgun sequence 50,534
JARUHJ010000012.1 Deltaproteobacteria bacterium IMCC39524 NODE_12_length_21415_cov_82.425404, whole genome shotgun sequence 21,415
JARUHJ010000013.1 Deltaproteobacteria bacterium IMCC39524 NODE_13_length_20284_cov_81.720097, whole genome shotgun sequence 20,284
JARUHJ010000014.1 Deltaproteobacteria bacterium IMCC39524 NODE_14_length_15657_cov_82.042048, whole genome shotgun sequence 15,657
JARUHJ010000015.1 Deltaproteobacteria bacterium IMCC39524 NODE_15_length_11014_cov_80.871957, whole genome shotgun sequence 11,014
JARUHJ010000016.1 Deltaproteobacteria bacterium IMCC39524 NODE_17_length_1665_cov_86.888817, whole genome shotgun sequence 1,665
JARUHJ010000017.1 Deltaproteobacteria bacterium IMCC39524 NODE_18_length_1534_cov_78.836532, whole genome shotgun sequence 1,534
JARUHJ010000018.1 Deltaproteobacteria bacterium IMCC39524 NODE_24_length_897_cov_70.281818, whole genome shotgun sequence 897
JARUHJ010000019.1 Deltaproteobacteria bacterium IMCC39524 NODE_29_length_698_cov_1.108581, whole genome shotgun sequence 698

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory