fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAOUOS01 sp029880285 8_1_Oct_SF_Bin24

Genome identifier: GCA_029880285.1

NCBI assembly name: ASM2988028v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Turneriellales, JAOUOS01, JAOUOS01, JAOUOS01 sp029880285

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia

Scaffolds: 102

Genes: 3,046 Protein-coding: 2,977 RNAs: 41 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAOUOS010000001.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_11_c1, whole genome shotgun sequence 224,026
JAOUOS010000002.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_13_c1, whole genome shotgun sequence 215,464
JAOUOS010000003.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_31_c1, whole genome shotgun sequence 160,631
JAOUOS010000004.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_34_c1, whole genome shotgun sequence 151,678
JAOUOS010000005.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_35_c1, whole genome shotgun sequence 149,766
JAOUOS010000006.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_54_c1, whole genome shotgun sequence 126,578
JAOUOS010000007.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_64_c1, whole genome shotgun sequence 120,145
JAOUOS010000008.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_76_c1, whole genome shotgun sequence 108,765
JAOUOS010000009.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_50_c1, whole genome shotgun sequence 108,695
JAOUOS010000010.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_82_c1, whole genome shotgun sequence 104,319
JAOUOS010000011.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_117_c1, whole genome shotgun sequence 81,717
JAOUOS010000012.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_119_c1, whole genome shotgun sequence 81,539
JAOUOS010000013.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_140_c1, whole genome shotgun sequence 74,374
JAOUOS010000014.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_153_c1, whole genome shotgun sequence 69,434
JAOUOS010000015.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_155_c1, whole genome shotgun sequence 69,106
JAOUOS010000016.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_157_c1, whole genome shotgun sequence 68,432
JAOUOS010000017.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_189_c1, whole genome shotgun sequence 59,025
JAOUOS010000018.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_199_c1, whole genome shotgun sequence 56,307
JAOUOS010000019.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_200_c1, whole genome shotgun sequence 56,268
JAOUOS010000020.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_206_c1, whole genome shotgun sequence 54,697
JAOUOS010000021.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_215_c1, whole genome shotgun sequence 53,018
JAOUOS010000022.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_133_c1, whole genome shotgun sequence 50,499
JAOUOS010000023.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_246_c1, whole genome shotgun sequence 49,062
JAOUOS010000024.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_277_c1, whole genome shotgun sequence 45,420
JAOUOS010000025.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_287_c1, whole genome shotgun sequence 44,266
JAOUOS010000026.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_288_c1, whole genome shotgun sequence 44,242
JAOUOS010000027.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_300_c1, whole genome shotgun sequence 43,755
JAOUOS010000028.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_310_c1, whole genome shotgun sequence 43,111
JAOUOS010000029.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_312_c1, whole genome shotgun sequence 42,799
JAOUOS010000030.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_326_c1, whole genome shotgun sequence 41,383
JAOUOS010000031.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_352_c1, whole genome shotgun sequence 39,421
JAOUOS010000032.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_412_c1, whole genome shotgun sequence 35,289
JAOUOS010000033.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_435_c1, whole genome shotgun sequence 33,987
JAOUOS010000034.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_449_c1, whole genome shotgun sequence 33,011
JAOUOS010000035.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_502_c1, whole genome shotgun sequence 31,330
JAOUOS010000036.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_133_c2, whole genome shotgun sequence 25,797
JAOUOS010000037.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_776_c1, whole genome shotgun sequence 24,994
JAOUOS010000038.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_789_c1, whole genome shotgun sequence 24,712
JAOUOS010000039.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_792_c1, whole genome shotgun sequence 24,674
JAOUOS010000040.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_929_c1, whole genome shotgun sequence 22,806
JAOUOS010000041.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_50_c2, whole genome shotgun sequence 20,979
JAOUOS010000042.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1263_c1, whole genome shotgun sequence 19,805
JAOUOS010000043.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1311_c1, whole genome shotgun sequence 19,516
JAOUOS010000044.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1328_c1, whole genome shotgun sequence 19,445
JAOUOS010000045.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1440_c1, whole genome shotgun sequence 18,681
JAOUOS010000046.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1586_c1, whole genome shotgun sequence 17,800
JAOUOS010000047.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1641_c1, whole genome shotgun sequence 17,538
JAOUOS010000048.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1655_c1, whole genome shotgun sequence 17,424
JAOUOS010000049.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_1932_c1, whole genome shotgun sequence 16,347
JAOUOS010000050.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_2751_c1, whole genome shotgun sequence 13,977
JAOUOS010000051.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_3008_c1, whole genome shotgun sequence 13,384
JAOUOS010000052.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_4659_c1, whole genome shotgun sequence 10,894
JAOUOS010000053.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_5038_c1, whole genome shotgun sequence 10,499
JAOUOS010000054.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_5992_c1, whole genome shotgun sequence 9,680
JAOUOS010000055.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_6507_c1, whole genome shotgun sequence 9,295
JAOUOS010000056.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_7379_c1, whole genome shotgun sequence 8,736
JAOUOS010000057.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_7772_c1, whole genome shotgun sequence 8,513
JAOUOS010000058.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_8589_c1, whole genome shotgun sequence 8,114
JAOUOS010000059.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_10048_c1, whole genome shotgun sequence 7,479
JAOUOS010000060.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_10420_c1, whole genome shotgun sequence 7,324
JAOUOS010000061.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_11390_c1, whole genome shotgun sequence 6,985
JAOUOS010000062.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_13549_c1, whole genome shotgun sequence 6,368
JAOUOS010000063.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_14716_c1, whole genome shotgun sequence 6,073
JAOUOS010000064.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_16754_c1, whole genome shotgun sequence 5,643
JAOUOS010000065.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_19847_c1, whole genome shotgun sequence 5,112
JAOUOS010000066.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_20196_c1, whole genome shotgun sequence 5,058
JAOUOS010000067.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_22409_c1, whole genome shotgun sequence 4,756
JAOUOS010000068.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_22637_c1, whole genome shotgun sequence 4,729
JAOUOS010000069.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_22867_c1, whole genome shotgun sequence 4,700
JAOUOS010000070.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_24546_c1, whole genome shotgun sequence 4,498
JAOUOS010000071.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_26593_c1, whole genome shotgun sequence 4,285
JAOUOS010000072.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_26810_c1, whole genome shotgun sequence 4,263
JAOUOS010000073.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_30821_c1, whole genome shotgun sequence 3,901
JAOUOS010000074.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_31272_c1, whole genome shotgun sequence 3,868
JAOUOS010000075.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_32417_c1, whole genome shotgun sequence 3,777
JAOUOS010000076.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_34341_c1, whole genome shotgun sequence 3,643
JAOUOS010000077.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_35723_c1, whole genome shotgun sequence 3,550
JAOUOS010000078.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_40160_c1, whole genome shotgun sequence 3,287
JAOUOS010000079.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_42154_c1, whole genome shotgun sequence 3,184
JAOUOS010000080.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_43939_c1, whole genome shotgun sequence 3,101
JAOUOS010000081.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_44120_c1, whole genome shotgun sequence 3,092
JAOUOS010000082.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_44716_c1, whole genome shotgun sequence 3,063
JAOUOS010000083.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_44830_c1, whole genome shotgun sequence 3,057
JAOUOS010000084.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_46030_c1, whole genome shotgun sequence 3,005
JAOUOS010000085.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_48446_c1, whole genome shotgun sequence 2,906
JAOUOS010000086.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_51409_c1, whole genome shotgun sequence 2,792
JAOUOS010000087.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_51634_c1, whole genome shotgun sequence 2,784
JAOUOS010000088.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_53304_c1, whole genome shotgun sequence 2,726
JAOUOS010000089.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_57003_c1, whole genome shotgun sequence 2,607
JAOUOS010000090.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_58537_c1, whole genome shotgun sequence 2,561
JAOUOS010000091.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_62151_c1, whole genome shotgun sequence 2,457
JAOUOS010000092.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_63536_c1, whole genome shotgun sequence 2,421
JAOUOS010000093.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_64128_c1, whole genome shotgun sequence 2,406
JAOUOS010000094.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_64264_c1, whole genome shotgun sequence 2,403
JAOUOS010000095.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_67187_c1, whole genome shotgun sequence 2,331
JAOUOS010000096.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_71872_c1, whole genome shotgun sequence 2,227
JAOUOS010000097.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_74004_c1, whole genome shotgun sequence 2,182
JAOUOS010000098.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_77717_c1, whole genome shotgun sequence 2,108
JAOUOS010000099.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_78118_c1, whole genome shotgun sequence 2,100
JAOUOS010000100.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_79429_c1, whole genome shotgun sequence 2,077
JAOUOS010000101.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_81922_c1, whole genome shotgun sequence 2,033
JAOUOS010000102.1 MAG: Spirochaetia bacterium isolate 8_1_Oct_SF_Bin24 8_1_Oct_SF_Bin24_scaffold_83923_c1, whole genome shotgun sequence 2,001

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory