fast.genomicscompare 6,575 genera of bacteria & archaea

 

JANLFM01 sp024655965 A05DMB-I-09

Genome identifier: GCA_029907615.1

NCBI assembly name: ASM2990761v1

GTDB taxonomy: Bacteria, JANLFM01, JANLFM01, JANLFM01, JANLFM01, JANLFM01, JANLFM01 sp024655965

NCBI taxonomy: Bacteria, Caldisericota

Scaffolds: 19

Genes: 1,578 Protein-coding: 1,509 RNAs: 62 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JARYLP010000001.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_1_length_492224_cov_73.310641, whole genome shotgun sequence 492,224
JARYLP010000002.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_2_length_435556_cov_72.311142, whole genome shotgun sequence 435,556
JARYLP010000003.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_3_length_409876_cov_71.579984, whole genome shotgun sequence 409,876
JARYLP010000004.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_4_length_121928_cov_71.572396, whole genome shotgun sequence 121,928
JARYLP010000005.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_5_length_65457_cov_73.975436, whole genome shotgun sequence 65,457
JARYLP010000006.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_6_length_30879_cov_74.726544, whole genome shotgun sequence 30,879
JARYLP010000007.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_7_length_12103_cov_75.199318, whole genome shotgun sequence 12,103
JARYLP010000008.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_8_length_1787_cov_37.316959, whole genome shotgun sequence 1,787
JARYLP010000009.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_9_length_1490_cov_85.027601, whole genome shotgun sequence 1,490
JARYLP010000010.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_10_length_1426_cov_85.832468, whole genome shotgun sequence 1,426
JARYLP010000011.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_11_length_1416_cov_86.080657, whole genome shotgun sequence 1,416
JARYLP010000012.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_12_length_847_cov_40.936364, whole genome shotgun sequence 847
JARYLP010000013.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_13_length_826_cov_2.109479, whole genome shotgun sequence 826
JARYLP010000014.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_14_length_715_cov_5.148903, whole genome shotgun sequence 715
JARYLP010000015.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_15_length_606_cov_120.338374, whole genome shotgun sequence 606
JARYLP010000016.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_16_length_591_cov_101.011673, whole genome shotgun sequence 591
JARYLP010000017.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_17_length_555_cov_39.002092, whole genome shotgun sequence 555
JARYLP010000018.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_18_length_532_cov_15.883516, whole genome shotgun sequence 532
JARYLP010000019.1 MAG: Caldisericota bacterium isolate A05DMB-I-09 NODE_19_length_520_cov_7.873589, whole genome shotgun sequence 520

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory