fast.genomicscompare 6,575 genera of bacteria & archaea

 

Saccharicenans sp030017715 Yes71-14

Genome identifier: GCA_030017715.1

NCBI assembly name: ASM3001771v1

GTDB taxonomy: Bacteria, Acidobacteriota, Aminicenantia, Aminicenantales, Saccharicenantaceae, Saccharicenans, Saccharicenans sp030017715

NCBI taxonomy: Bacteria, Candidatus Aminicenantes, Candidatus Saccharicenans

Scaffolds: 18

Genes: 2,377 Protein-coding: 2,299 RNAs: 61 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JASEIU010000001.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_1_length_1170667_cov_69.467931, whole genome shotgun sequence 1,170,667
JASEIU010000002.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_2_length_551798_cov_70.325838, whole genome shotgun sequence 551,798
JASEIU010000003.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_3_length_396097_cov_69.148338, whole genome shotgun sequence 396,097
JASEIU010000004.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_4_length_264644_cov_70.211180, whole genome shotgun sequence 264,644
JASEIU010000005.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_5_length_240768_cov_69.759265, whole genome shotgun sequence 240,768
JASEIU010000006.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_6_length_109494_cov_69.955427, whole genome shotgun sequence 109,494
JASEIU010000007.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_7_length_100919_cov_68.926227, whole genome shotgun sequence 100,919
JASEIU010000008.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_8_length_27540_cov_66.228670, whole genome shotgun sequence 27,540
JASEIU010000009.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_9_length_10504_cov_53.189205, whole genome shotgun sequence 10,504
JASEIU010000010.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_10_length_8578_cov_56.353631, whole genome shotgun sequence 8,578
JASEIU010000011.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_11_length_5820_cov_57.870772, whole genome shotgun sequence 5,820
JASEIU010000012.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_12_length_1788_cov_5.945759, whole genome shotgun sequence 1,788
JASEIU010000013.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_13_length_1577_cov_52.202365, whole genome shotgun sequence 1,577
JASEIU010000014.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_14_length_1294_cov_134.922518, whole genome shotgun sequence 1,294
JASEIU010000015.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_15_length_989_cov_9.653105, whole genome shotgun sequence 989
JASEIU010000016.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_16_length_732_cov_10.143279, whole genome shotgun sequence 732
JASEIU010000017.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_17_length_687_cov_17.115506, whole genome shotgun sequence 687
JASEIU010000018.1 MAG: Candidatus Saccharicenans sp. isolate Yes71-14 NODE_18_length_501_cov_3.704698, whole genome shotgun sequence 501

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory