fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAEWPB01 sp030028905 n36

Genome identifier: GCA_030028905.1

NCBI assembly name: ASM3002890v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, JAEWPB01, JAEWPB01 sp030028905

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhizobiaceae

Scaffolds: 67

Genes: 4,981 Protein-coding: 4,819 RNAs: 53 pseudogenes: 109

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALDYZ010000001.1 Fererhizobium litorale strain KMM 9576 NODE_1_length_697270_cov_61.939937, whole genome shotgun sequence 697,270
JALDYZ010000002.1 Fererhizobium litorale strain KMM 9576 NODE_2_length_693924_cov_58.688755, whole genome shotgun sequence 693,924
JALDYZ010000003.1 Fererhizobium litorale strain KMM 9576 NODE_3_length_518348_cov_49.505297, whole genome shotgun sequence 518,348
JALDYZ010000004.1 Fererhizobium litorale strain KMM 9576 NODE_4_length_370919_cov_64.293318, whole genome shotgun sequence 370,919
JALDYZ010000005.1 Fererhizobium litorale strain KMM 9576 NODE_5_length_350002_cov_47.332122, whole genome shotgun sequence 350,002
JALDYZ010000006.1 Fererhizobium litorale strain KMM 9576 NODE_6_length_268487_cov_55.242795, whole genome shotgun sequence 268,487
JALDYZ010000007.1 Fererhizobium litorale strain KMM 9576 NODE_7_length_264094_cov_67.899106, whole genome shotgun sequence 264,094
JALDYZ010000008.1 Fererhizobium litorale strain KMM 9576 NODE_8_length_220073_cov_57.123181, whole genome shotgun sequence 220,073
JALDYZ010000009.1 Fererhizobium litorale strain KMM 9576 NODE_9_length_186765_cov_66.291613, whole genome shotgun sequence 186,765
JALDYZ010000010.1 Fererhizobium litorale strain KMM 9576 NODE_10_length_184259_cov_50.569608, whole genome shotgun sequence 184,259
JALDYZ010000011.1 Fererhizobium litorale strain KMM 9576 NODE_11_length_178621_cov_68.326697, whole genome shotgun sequence 178,621
JALDYZ010000012.1 Fererhizobium litorale strain KMM 9576 NODE_12_length_158726_cov_57.686534, whole genome shotgun sequence 158,726
JALDYZ010000013.1 Fererhizobium litorale strain KMM 9576 NODE_13_length_146218_cov_55.122028, whole genome shotgun sequence 146,218
JALDYZ010000014.1 Fererhizobium litorale strain KMM 9576 NODE_14_length_127646_cov_49.706304, whole genome shotgun sequence 127,646
JALDYZ010000015.1 Fererhizobium litorale strain KMM 9576 NODE_15_length_114860_cov_56.360550, whole genome shotgun sequence 114,860
JALDYZ010000016.1 Fererhizobium litorale strain KMM 9576 NODE_16_length_93792_cov_68.741820, whole genome shotgun sequence 93,792
JALDYZ010000017.1 Fererhizobium litorale strain KMM 9576 NODE_17_length_92084_cov_57.618088, whole genome shotgun sequence 92,084
JALDYZ010000018.1 Fererhizobium litorale strain KMM 9576 NODE_18_length_84835_cov_47.153149, whole genome shotgun sequence 84,835
JALDYZ010000019.1 Fererhizobium litorale strain KMM 9576 NODE_19_length_74119_cov_49.938391, whole genome shotgun sequence 74,119
JALDYZ010000020.1 Fererhizobium litorale strain KMM 9576 NODE_20_length_70763_cov_67.944787, whole genome shotgun sequence 70,763
JALDYZ010000021.1 Fererhizobium litorale strain KMM 9576 NODE_21_length_64099_cov_66.059256, whole genome shotgun sequence 64,099
JALDYZ010000022.1 Fererhizobium litorale strain KMM 9576 NODE_22_length_57232_cov_55.027074, whole genome shotgun sequence 57,232
JALDYZ010000023.1 Fererhizobium litorale strain KMM 9576 NODE_23_length_48379_cov_54.533669, whole genome shotgun sequence 48,379
JALDYZ010000024.1 Fererhizobium litorale strain KMM 9576 NODE_24_length_42103_cov_50.276494, whole genome shotgun sequence 42,103
JALDYZ010000025.1 Fererhizobium litorale strain KMM 9576 NODE_25_length_33195_cov_20.615329, whole genome shotgun sequence 33,195
JALDYZ010000026.1 Fererhizobium litorale strain KMM 9576 NODE_26_length_21158_cov_57.654551, whole genome shotgun sequence 21,158
JALDYZ010000027.1 Fererhizobium litorale strain KMM 9576 NODE_27_length_17769_cov_21.451733, whole genome shotgun sequence 17,769
JALDYZ010000028.1 Fererhizobium litorale strain KMM 9576 NODE_28_length_17254_cov_64.826618, whole genome shotgun sequence 17,254
JALDYZ010000029.1 Fererhizobium litorale strain KMM 9576 NODE_29_length_11591_cov_58.031727, whole genome shotgun sequence 11,591
JALDYZ010000030.1 Fererhizobium litorale strain KMM 9576 NODE_30_length_6846_cov_254.071271, whole genome shotgun sequence 6,846
JALDYZ010000031.1 Fererhizobium litorale strain KMM 9576 NODE_31_length_6610_cov_51.983371, whole genome shotgun sequence 6,610
JALDYZ010000032.1 Fererhizobium litorale strain KMM 9576 NODE_32_length_6603_cov_70.509621, whole genome shotgun sequence 6,603
JALDYZ010000033.1 Fererhizobium litorale strain KMM 9576 NODE_33_length_5153_cov_53.607101, whole genome shotgun sequence 5,153
JALDYZ010000034.1 Fererhizobium litorale strain KMM 9576 NODE_34_length_1785_cov_58.083237, whole genome shotgun sequence 1,785
JALDYZ010000035.1 Fererhizobium litorale strain KMM 9576 NODE_35_length_1662_cov_67.965775, whole genome shotgun sequence 1,662
JALDYZ010000036.1 Fererhizobium litorale strain KMM 9576 NODE_36_length_1358_cov_378.035303, whole genome shotgun sequence 1,358
JALDYZ010000037.1 Fererhizobium litorale strain KMM 9576 NODE_37_length_1219_cov_197.254296, whole genome shotgun sequence 1,219
JALDYZ010000038.1 Fererhizobium litorale strain KMM 9576 NODE_38_length_1179_cov_115.432384, whole genome shotgun sequence 1,179
JALDYZ010000039.1 Fererhizobium litorale strain KMM 9576 NODE_39_length_1176_cov_110.645852, whole genome shotgun sequence 1,176
JALDYZ010000040.1 Fererhizobium litorale strain KMM 9576 NODE_40_length_801_cov_317.794906, whole genome shotgun sequence 801
JALDYZ010000041.1 Fererhizobium litorale strain KMM 9576 NODE_41_length_774_cov_22.863700, whole genome shotgun sequence 774
JALDYZ010000042.1 Fererhizobium litorale strain KMM 9576 NODE_42_length_680_cov_368.832000, whole genome shotgun sequence 680
JALDYZ010000043.1 Fererhizobium litorale strain KMM 9576 NODE_43_length_623_cov_38.271127, whole genome shotgun sequence 623
JALDYZ010000044.1 Fererhizobium litorale strain KMM 9576 NODE_44_length_615_cov_56.028571, whole genome shotgun sequence 615
JALDYZ010000045.1 Fererhizobium litorale strain KMM 9576 NODE_45_length_578_cov_46.868069, whole genome shotgun sequence 578
JALDYZ010000046.1 Fererhizobium litorale strain KMM 9576 NODE_46_length_515_cov_335.156522, whole genome shotgun sequence 515
JALDYZ010000047.1 Fererhizobium litorale strain KMM 9576 NODE_47_length_343_cov_47.145833, whole genome shotgun sequence 343
JALDYZ010000048.1 Fererhizobium litorale strain KMM 9576 NODE_48_length_333_cov_0.809353, whole genome shotgun sequence 333
JALDYZ010000049.1 Fererhizobium litorale strain KMM 9576 NODE_49_length_327_cov_51.349265, whole genome shotgun sequence 327
JALDYZ010000050.1 Fererhizobium litorale strain KMM 9576 NODE_50_length_321_cov_56.586466, whole genome shotgun sequence 321
JALDYZ010000051.1 Fererhizobium litorale strain KMM 9576 NODE_51_length_315_cov_15.934615, whole genome shotgun sequence 315
JALDYZ010000052.1 Fererhizobium litorale strain KMM 9576 NODE_52_length_311_cov_55.289062, whole genome shotgun sequence 311
JALDYZ010000053.1 Fererhizobium litorale strain KMM 9576 NODE_53_length_238_cov_0.819672, whole genome shotgun sequence 238
JALDYZ010000054.1 Fererhizobium litorale strain KMM 9576 NODE_54_length_236_cov_0.828729, whole genome shotgun sequence 236
JALDYZ010000055.1 Fererhizobium litorale strain KMM 9576 NODE_55_length_235_cov_0.833333, whole genome shotgun sequence 235
JALDYZ010000056.1 Fererhizobium litorale strain KMM 9576 NODE_56_length_233_cov_0.842697, whole genome shotgun sequence 233
JALDYZ010000057.1 Fererhizobium litorale strain KMM 9576 NODE_57_length_232_cov_50.474576, whole genome shotgun sequence 232
JALDYZ010000058.1 Fererhizobium litorale strain KMM 9576 NODE_58_length_231_cov_54.914773, whole genome shotgun sequence 231
JALDYZ010000059.1 Fererhizobium litorale strain KMM 9576 NODE_59_length_230_cov_0.857143, whole genome shotgun sequence 230
JALDYZ010000060.1 Fererhizobium litorale strain KMM 9576 NODE_60_length_230_cov_0.857143, whole genome shotgun sequence 230
JALDYZ010000061.1 Fererhizobium litorale strain KMM 9576 NODE_61_length_228_cov_0.867052, whole genome shotgun sequence 228
JALDYZ010000062.1 Fererhizobium litorale strain KMM 9576 NODE_62_length_227_cov_0.872093, whole genome shotgun sequence 227
JALDYZ010000063.1 Fererhizobium litorale strain KMM 9576 NODE_63_length_226_cov_0.877193, whole genome shotgun sequence 226
JALDYZ010000064.1 Fererhizobium litorale strain KMM 9576 NODE_64_length_216_cov_0.807453, whole genome shotgun sequence 216
JALDYZ010000065.1 Fererhizobium litorale strain KMM 9576 NODE_65_length_213_cov_0.949367, whole genome shotgun sequence 213
JALDYZ010000066.1 Fererhizobium litorale strain KMM 9576 NODE_66_length_207_cov_0.986842, whole genome shotgun sequence 207
JALDYZ010000067.1 Fererhizobium litorale strain KMM 9576 NODE_67_length_202_cov_59.993197, whole genome shotgun sequence 202

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory