fast.genomicscompare 6,575 genera of bacteria & archaea

 

JASGCL01 sp030054115 MAG16

Genome identifier: GCA_030054115.1

NCBI assembly name: ASM3005411v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, JASGGL01, JASGCL01, JASGCL01, JASGCL01 sp030054115

NCBI taxonomy: Bacteria, Bacteroidota, Chitinophagia, Chitinophagales, Chitinophagaceae, Hydrotalea

Scaffolds: 91

Genes: 1,555 Protein-coding: 1,502 RNAs: 48 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JASGCL010000001.1 MAG: Hydrotalea sp. isolate MAG16 NODE_29_length_152443_cov_127.824566, whole genome shotgun sequence 152,443
JASGCL010000002.1 MAG: Hydrotalea sp. isolate MAG16 NODE_68_length_98970_cov_127.137664, whole genome shotgun sequence 98,970
JASGCL010000003.1 MAG: Hydrotalea sp. isolate MAG16 NODE_158_length_69787_cov_125.956103, whole genome shotgun sequence 69,787
JASGCL010000004.1 MAG: Hydrotalea sp. isolate MAG16 NODE_168_length_67617_cov_127.115287, whole genome shotgun sequence 67,617
JASGCL010000005.1 MAG: Hydrotalea sp. isolate MAG16 NODE_186_length_64758_cov_127.441803, whole genome shotgun sequence 64,758
JASGCL010000006.1 MAG: Hydrotalea sp. isolate MAG16 NODE_238_length_57140_cov_128.369677, whole genome shotgun sequence 57,140
JASGCL010000007.1 MAG: Hydrotalea sp. isolate MAG16 NODE_240_length_57073_cov_125.878617, whole genome shotgun sequence 57,073
JASGCL010000008.1 MAG: Hydrotalea sp. isolate MAG16 NODE_276_length_52911_cov_124.357197, whole genome shotgun sequence 52,911
JASGCL010000009.1 MAG: Hydrotalea sp. isolate MAG16 NODE_287_length_52035_cov_128.774125, whole genome shotgun sequence 52,035
JASGCL010000010.1 MAG: Hydrotalea sp. isolate MAG16 NODE_379_length_44970_cov_127.087677, whole genome shotgun sequence 44,970
JASGCL010000011.1 MAG: Hydrotalea sp. isolate MAG16 NODE_408_length_43126_cov_127.620998, whole genome shotgun sequence 43,126
JASGCL010000012.1 MAG: Hydrotalea sp. isolate MAG16 NODE_433_length_41195_cov_129.041152, whole genome shotgun sequence 41,195
JASGCL010000013.1 MAG: Hydrotalea sp. isolate MAG16 NODE_451_length_40381_cov_125.835962, whole genome shotgun sequence 40,381
JASGCL010000014.1 MAG: Hydrotalea sp. isolate MAG16 NODE_468_length_39652_cov_129.534586, whole genome shotgun sequence 39,652
JASGCL010000015.1 MAG: Hydrotalea sp. isolate MAG16 NODE_558_length_35745_cov_125.347156, whole genome shotgun sequence 35,745
JASGCL010000016.1 MAG: Hydrotalea sp. isolate MAG16 NODE_686_length_30912_cov_126.695045, whole genome shotgun sequence 30,912
JASGCL010000017.1 MAG: Hydrotalea sp. isolate MAG16 NODE_705_length_30276_cov_126.285728, whole genome shotgun sequence 30,276
JASGCL010000018.1 MAG: Hydrotalea sp. isolate MAG16 NODE_755_length_28647_cov_125.619894, whole genome shotgun sequence 28,647
JASGCL010000019.1 MAG: Hydrotalea sp. isolate MAG16 NODE_757_length_28611_cov_126.860975, whole genome shotgun sequence 28,611
JASGCL010000020.1 MAG: Hydrotalea sp. isolate MAG16 NODE_800_length_27667_cov_126.371759, whole genome shotgun sequence 27,667
JASGCL010000021.1 MAG: Hydrotalea sp. isolate MAG16 NODE_847_length_26538_cov_123.946267, whole genome shotgun sequence 26,538
JASGCL010000022.1 MAG: Hydrotalea sp. isolate MAG16 NODE_874_length_26040_cov_125.403541, whole genome shotgun sequence 26,040
JASGCL010000023.1 MAG: Hydrotalea sp. isolate MAG16 NODE_891_length_25713_cov_125.252631, whole genome shotgun sequence 25,713
JASGCL010000024.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1005_length_23440_cov_125.099380, whole genome shotgun sequence 23,440
JASGCL010000025.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1062_length_22385_cov_124.111644, whole genome shotgun sequence 22,385
JASGCL010000026.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1088_length_22033_cov_124.885340, whole genome shotgun sequence 22,033
JASGCL010000027.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1195_length_20368_cov_125.149609, whole genome shotgun sequence 20,368
JASGCL010000028.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1257_length_19544_cov_126.572015, whole genome shotgun sequence 19,544
JASGCL010000029.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1342_length_18564_cov_121.350532, whole genome shotgun sequence 18,564
JASGCL010000030.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1445_length_17441_cov_126.566203, whole genome shotgun sequence 17,441
JASGCL010000031.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1493_length_16977_cov_126.135327, whole genome shotgun sequence 16,977
JASGCL010000032.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1658_length_15752_cov_123.517933, whole genome shotgun sequence 15,752
JASGCL010000033.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1836_length_14666_cov_127.347820, whole genome shotgun sequence 14,666
JASGCL010000034.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1855_length_14564_cov_46.772555, whole genome shotgun sequence 14,564
JASGCL010000035.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1919_length_14228_cov_126.853030, whole genome shotgun sequence 14,228
JASGCL010000036.1 MAG: Hydrotalea sp. isolate MAG16 NODE_1997_length_13847_cov_127.225928, whole genome shotgun sequence 13,847
JASGCL010000037.1 MAG: Hydrotalea sp. isolate MAG16 NODE_2355_length_12343_cov_126.962077, whole genome shotgun sequence 12,343
JASGCL010000038.1 MAG: Hydrotalea sp. isolate MAG16 NODE_2365_length_12320_cov_126.082674, whole genome shotgun sequence 12,320
JASGCL010000039.1 MAG: Hydrotalea sp. isolate MAG16 NODE_2394_length_12237_cov_122.422180, whole genome shotgun sequence 12,237
JASGCL010000040.1 MAG: Hydrotalea sp. isolate MAG16 NODE_2488_length_11947_cov_126.389253, whole genome shotgun sequence 11,947
JASGCL010000041.1 MAG: Hydrotalea sp. isolate MAG16 NODE_2619_length_11552_cov_126.721754, whole genome shotgun sequence 11,552
JASGCL010000042.1 MAG: Hydrotalea sp. isolate MAG16 NODE_3207_length_10118_cov_130.063798, whole genome shotgun sequence 10,118
JASGCL010000043.1 MAG: Hydrotalea sp. isolate MAG16 NODE_3213_length_10106_cov_128.380559, whole genome shotgun sequence 10,106
JASGCL010000044.1 MAG: Hydrotalea sp. isolate MAG16 NODE_3354_length_9829_cov_124.591672, whole genome shotgun sequence 9,829
JASGCL010000045.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4174_length_8566_cov_124.512748, whole genome shotgun sequence 8,566
JASGCL010000046.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4190_length_8552_cov_127.424385, whole genome shotgun sequence 8,552
JASGCL010000047.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4191_length_8552_cov_125.192185, whole genome shotgun sequence 8,552
JASGCL010000048.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4531_length_8146_cov_124.391423, whole genome shotgun sequence 8,146
JASGCL010000049.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4797_length_7860_cov_125.293786, whole genome shotgun sequence 7,860
JASGCL010000050.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4823_length_7837_cov_120.228733, whole genome shotgun sequence 7,837
JASGCL010000051.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4847_length_7819_cov_126.396574, whole genome shotgun sequence 7,819
JASGCL010000052.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4943_length_7735_cov_127.786719, whole genome shotgun sequence 7,735
JASGCL010000053.1 MAG: Hydrotalea sp. isolate MAG16 NODE_4944_length_7734_cov_127.763511, whole genome shotgun sequence 7,734
JASGCL010000054.1 MAG: Hydrotalea sp. isolate MAG16 NODE_5192_length_7514_cov_122.976404, whole genome shotgun sequence 7,514
JASGCL010000055.1 MAG: Hydrotalea sp. isolate MAG16 NODE_6135_length_6808_cov_125.074041, whole genome shotgun sequence 6,808
JASGCL010000056.1 MAG: Hydrotalea sp. isolate MAG16 NODE_6868_length_6360_cov_123.766217, whole genome shotgun sequence 6,360
JASGCL010000057.1 MAG: Hydrotalea sp. isolate MAG16 NODE_7158_length_6198_cov_128.960931, whole genome shotgun sequence 6,198
JASGCL010000058.1 MAG: Hydrotalea sp. isolate MAG16 NODE_8413_length_5614_cov_120.616478, whole genome shotgun sequence 5,614
JASGCL010000059.1 MAG: Hydrotalea sp. isolate MAG16 NODE_8626_length_5535_cov_123.362226, whole genome shotgun sequence 5,535
JASGCL010000060.1 MAG: Hydrotalea sp. isolate MAG16 NODE_9409_length_5228_cov_125.457761, whole genome shotgun sequence 5,228
JASGCL010000061.1 MAG: Hydrotalea sp. isolate MAG16 NODE_10447_length_4908_cov_122.970328, whole genome shotgun sequence 4,908
JASGCL010000062.1 MAG: Hydrotalea sp. isolate MAG16 NODE_10622_length_4862_cov_129.155398, whole genome shotgun sequence 4,862
JASGCL010000063.1 MAG: Hydrotalea sp. isolate MAG16 NODE_11193_length_4709_cov_124.930597, whole genome shotgun sequence 4,709
JASGCL010000064.1 MAG: Hydrotalea sp. isolate MAG16 NODE_11368_length_4661_cov_124.714937, whole genome shotgun sequence 4,661
JASGCL010000065.1 MAG: Hydrotalea sp. isolate MAG16 NODE_11648_length_4593_cov_47.198766, whole genome shotgun sequence 4,593
JASGCL010000066.1 MAG: Hydrotalea sp. isolate MAG16 NODE_12972_length_4289_cov_130.012518, whole genome shotgun sequence 4,289
JASGCL010000067.1 MAG: Hydrotalea sp. isolate MAG16 NODE_13603_length_4164_cov_129.254320, whole genome shotgun sequence 4,164
JASGCL010000068.1 MAG: Hydrotalea sp. isolate MAG16 NODE_14662_length_3962_cov_125.804198, whole genome shotgun sequence 3,962
JASGCL010000069.1 MAG: Hydrotalea sp. isolate MAG16 NODE_16505_length_3664_cov_118.486284, whole genome shotgun sequence 3,664
JASGCL010000070.1 MAG: Hydrotalea sp. isolate MAG16 NODE_17116_length_3569_cov_118.372795, whole genome shotgun sequence 3,569
JASGCL010000071.1 MAG: Hydrotalea sp. isolate MAG16 NODE_17289_length_3544_cov_129.556320, whole genome shotgun sequence 3,544
JASGCL010000072.1 MAG: Hydrotalea sp. isolate MAG16 NODE_17295_length_3543_cov_132.046732, whole genome shotgun sequence 3,543
JASGCL010000073.1 MAG: Hydrotalea sp. isolate MAG16 NODE_17595_length_3500_cov_120.676052, whole genome shotgun sequence 3,500
JASGCL010000074.1 MAG: Hydrotalea sp. isolate MAG16 NODE_22225_length_2966_cov_123.106149, whole genome shotgun sequence 2,966
JASGCL010000075.1 MAG: Hydrotalea sp. isolate MAG16 NODE_24412_length_2754_cov_133.929974, whole genome shotgun sequence 2,754
JASGCL010000076.1 MAG: Hydrotalea sp. isolate MAG16 NODE_24430_length_2753_cov_119.775389, whole genome shotgun sequence 2,753
JASGCL010000077.1 MAG: Hydrotalea sp. isolate MAG16 NODE_25169_length_2692_cov_43.245734, whole genome shotgun sequence 2,692
JASGCL010000078.1 MAG: Hydrotalea sp. isolate MAG16 NODE_25380_length_2674_cov_131.447881, whole genome shotgun sequence 2,674
JASGCL010000079.1 MAG: Hydrotalea sp. isolate MAG16 NODE_25756_length_2644_cov_42.613364, whole genome shotgun sequence 2,644
JASGCL010000080.1 MAG: Hydrotalea sp. isolate MAG16 NODE_26324_length_2599_cov_39.313286, whole genome shotgun sequence 2,599
JASGCL010000081.1 MAG: Hydrotalea sp. isolate MAG16 NODE_28136_length_2466_cov_132.469929, whole genome shotgun sequence 2,466
JASGCL010000082.1 MAG: Hydrotalea sp. isolate MAG16 NODE_28378_length_2448_cov_50.684914, whole genome shotgun sequence 2,448
JASGCL010000083.1 MAG: Hydrotalea sp. isolate MAG16 NODE_29150_length_2396_cov_127.434003, whole genome shotgun sequence 2,396
JASGCL010000084.1 MAG: Hydrotalea sp. isolate MAG16 NODE_30959_length_2279_cov_126.245054, whole genome shotgun sequence 2,279
JASGCL010000085.1 MAG: Hydrotalea sp. isolate MAG16 NODE_32680_length_2178_cov_122.118700, whole genome shotgun sequence 2,178
JASGCL010000086.1 MAG: Hydrotalea sp. isolate MAG16 NODE_33064_length_2156_cov_124.312232, whole genome shotgun sequence 2,156
JASGCL010000087.1 MAG: Hydrotalea sp. isolate MAG16 NODE_33532_length_2130_cov_120.605301, whole genome shotgun sequence 2,130
JASGCL010000088.1 MAG: Hydrotalea sp. isolate MAG16 NODE_33872_length_2113_cov_123.706025, whole genome shotgun sequence 2,113
JASGCL010000089.1 MAG: Hydrotalea sp. isolate MAG16 NODE_34191_length_2097_cov_131.496572, whole genome shotgun sequence 2,097
JASGCL010000090.1 MAG: Hydrotalea sp. isolate MAG16 NODE_34454_length_2085_cov_125.541379, whole genome shotgun sequence 2,085
JASGCL010000091.1 MAG: Hydrotalea sp. isolate MAG16 NODE_35257_length_2046_cov_44.512305, whole genome shotgun sequence 2,046

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory