fast.genomicscompare 6,575 genera of bacteria & archaea

 

JASMHE01 sp030750865 ETNP7_MAG_65

Genome identifier: GCA_030750865.1

NCBI assembly name: ASM3075086v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micavibrionales, Micavibrionaceae, JASMHE01, JASMHE01 sp030750865

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 14

Genes: 2,009 Protein-coding: 1,958 RNAs: 45 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JASMHE010000001.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000082588, whole genome shotgun sequence 155,183
JASMHE010000002.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000287236, whole genome shotgun sequence 103,873
JASMHE010000003.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000367827, whole genome shotgun sequence 130,659
JASMHE010000004.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000431202, whole genome shotgun sequence 54,409
JASMHE010000005.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000839891, whole genome shotgun sequence 53,219
JASMHE010000006.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000000933620, whole genome shotgun sequence 151,680
JASMHE010000007.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000001247758, whole genome shotgun sequence 242,688
JASMHE010000008.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000001538812, whole genome shotgun sequence 748,916
JASMHE010000009.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000001769118, whole genome shotgun sequence 69,843
JASMHE010000010.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000001876356, whole genome shotgun sequence 163,888
JASMHE010000011.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000001879440, whole genome shotgun sequence 44,143
JASMHE010000012.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000002005649, whole genome shotgun sequence 85,203
JASMHE010000013.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000002113403, whole genome shotgun sequence 136,548
JASMHE010000014.1 MAG: Alphaproteobacteria bacterium isolate ETNP7_MAG_65 c_000002243985, whole genome shotgun sequence 47,879

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory