fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAUZRS01 sp030949385 Faavne_M6_B8

Genome identifier: GCA_030949385.1

NCBI assembly name: ASM3094938v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, JAUZRS01, JAUZRS01, JAUZRS01, JAUZRS01 sp030949385

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria

Scaffolds: 10

Genes: 2,814 Protein-coding: 2,659 RNAs: 50 pseudogenes: 105

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAUZSP010000001.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_1076_pilon, whole genome shotgun sequence 416,856
JAUZSP010000002.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_1318_pilon, whole genome shotgun sequence 329,246
JAUZSP010000003.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_1520_pilon, whole genome shotgun sequence 584,771
JAUZSP010000004.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_1757_pilon, whole genome shotgun sequence 66,403
JAUZSP010000005.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_1888_pilon, whole genome shotgun sequence 103,145
JAUZSP010000006.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_2242_pilon, whole genome shotgun sequence 448,595
JAUZSP010000007.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_4203_pilon, whole genome shotgun sequence 399,860
JAUZSP010000008.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_4204_pilon, whole genome shotgun sequence 196,640
JAUZSP010000009.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_4319_pilon, whole genome shotgun sequence 168,432
JAUZSP010000010.1 MAG: Gammaproteobacteria bacterium isolate Faavne_M6_B8 Faavne_M6_B8-contig_4320_pilon, whole genome shotgun sequence 154,312

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory