fast.genomicscompare 6,575 genera of bacteria & archaea

 

WTBX01 sp030949405 Faavne_M6_B6

Genome identifier: GCA_030949405.1

NCBI assembly name: ASM3094940v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylomonadaceae, WTBX01, WTBX01 sp030949405

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales

Scaffolds: 5

Genes: 3,069 Protein-coding: 2,960 RNAs: 54 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAUZSN010000001.1 MAG: Methylococcales bacterium isolate Faavne_M6_B6 Faavne_M6_B6-contig_1705_pilon, whole genome shotgun sequence 3,611
JAUZSN010000002.1 MAG: Methylococcales bacterium isolate Faavne_M6_B6 Faavne_M6_B6-contig_1783_pilon, whole genome shotgun sequence 2,969,825
JAUZSN010000003.1 MAG: Methylococcales bacterium isolate Faavne_M6_B6 Faavne_M6_B6-contig_3192_pilon, whole genome shotgun sequence 2,435
JAUZSN010000004.1 MAG: Methylococcales bacterium isolate Faavne_M6_B6 Faavne_M6_B6-contig_86_pilon, whole genome shotgun sequence 2,730
JAUZSN010000005.1 MAG: Methylococcales bacterium isolate Faavne_M6_B6 Faavne_M6_B6-contig_862_pilon, whole genome shotgun sequence 4,236

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory