fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAVHLZ01 sp031081675 O5J2P.bin.142

Genome identifier: GCA_031081675.1

NCBI assembly name: ASM3108167v1

GTDB taxonomy: Bacteria, CSP1-3, CSP1-3, CSP1-3, 13-1-40CM-64-14, JAVHLZ01, JAVHLZ01 sp031081675

NCBI taxonomy: Bacteria, Armatimonadota

Scaffolds: 50

Genes: 2,289 Protein-coding: 2,226 RNAs: 52 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAVHLZ010000001.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_171_length_163232_cov_109.458356, whole genome shotgun sequence 163,232
JAVHLZ010000002.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_237_length_137438_cov_115.739076, whole genome shotgun sequence 137,438
JAVHLZ010000003.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_267_length_130278_cov_121.006990, whole genome shotgun sequence 130,278
JAVHLZ010000004.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_286_length_124634_cov_108.659180, whole genome shotgun sequence 124,634
JAVHLZ010000005.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_342_length_112465_cov_109.979985, whole genome shotgun sequence 112,465
JAVHLZ010000006.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_354_length_110257_cov_108.078887, whole genome shotgun sequence 110,257
JAVHLZ010000007.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_357_length_109430_cov_106.761632, whole genome shotgun sequence 109,430
JAVHLZ010000008.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_462_length_93276_cov_115.156938, whole genome shotgun sequence 93,276
JAVHLZ010000009.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_480_length_89767_cov_108.068352, whole genome shotgun sequence 89,767
JAVHLZ010000010.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_548_length_80824_cov_111.817566, whole genome shotgun sequence 80,824
JAVHLZ010000011.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_574_length_78143_cov_109.483317, whole genome shotgun sequence 78,143
JAVHLZ010000012.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_625_length_73577_cov_112.669357, whole genome shotgun sequence 73,577
JAVHLZ010000013.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_680_length_69694_cov_107.925799, whole genome shotgun sequence 69,694
JAVHLZ010000014.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_850_length_59361_cov_111.629425, whole genome shotgun sequence 59,361
JAVHLZ010000015.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_873_length_58524_cov_109.689688, whole genome shotgun sequence 58,524
JAVHLZ010000016.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_916_length_56737_cov_107.672993, whole genome shotgun sequence 56,737
JAVHLZ010000017.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1010_length_52742_cov_116.074027, whole genome shotgun sequence 52,742
JAVHLZ010000018.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1275_length_44209_cov_107.387168, whole genome shotgun sequence 44,209
JAVHLZ010000019.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1322_length_42815_cov_105.309275, whole genome shotgun sequence 42,815
JAVHLZ010000020.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1406_length_40873_cov_121.280473, whole genome shotgun sequence 40,873
JAVHLZ010000021.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1413_length_40646_cov_120.399956, whole genome shotgun sequence 40,646
JAVHLZ010000022.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1469_length_39217_cov_121.087556, whole genome shotgun sequence 39,217
JAVHLZ010000023.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1554_length_37239_cov_121.108966, whole genome shotgun sequence 37,239
JAVHLZ010000024.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1608_length_36240_cov_110.674552, whole genome shotgun sequence 36,240
JAVHLZ010000025.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1679_length_34849_cov_124.229324, whole genome shotgun sequence 34,849
JAVHLZ010000026.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_1888_length_31666_cov_114.540089, whole genome shotgun sequence 31,666
JAVHLZ010000027.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_2030_length_29759_cov_108.408463, whole genome shotgun sequence 29,759
JAVHLZ010000028.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_2037_length_29702_cov_103.352025, whole genome shotgun sequence 29,702
JAVHLZ010000029.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_2208_length_27726_cov_114.052557, whole genome shotgun sequence 27,726
JAVHLZ010000030.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_2880_length_22090_cov_122.513483, whole genome shotgun sequence 22,090
JAVHLZ010000031.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_2999_length_21491_cov_113.621634, whole genome shotgun sequence 21,491
JAVHLZ010000032.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_3133_length_20681_cov_122.326159, whole genome shotgun sequence 20,681
JAVHLZ010000033.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_3135_length_20676_cov_113.129562, whole genome shotgun sequence 20,676
JAVHLZ010000034.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_3550_length_18490_cov_103.125279, whole genome shotgun sequence 18,490
JAVHLZ010000035.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_3726_length_17717_cov_109.960722, whole genome shotgun sequence 17,717
JAVHLZ010000036.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_3872_length_17130_cov_96.131642, whole genome shotgun sequence 17,130
JAVHLZ010000037.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_4312_length_15409_cov_120.776682, whole genome shotgun sequence 15,409
JAVHLZ010000038.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_4392_length_15166_cov_107.171102, whole genome shotgun sequence 15,166
JAVHLZ010000039.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_5204_length_12960_cov_114.489464, whole genome shotgun sequence 12,960
JAVHLZ010000040.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_5996_length_11420_cov_112.837205, whole genome shotgun sequence 11,420
JAVHLZ010000041.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_6287_length_10935_cov_106.373846, whole genome shotgun sequence 10,935
JAVHLZ010000042.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_7017_length_9874_cov_117.303018, whole genome shotgun sequence 9,874
JAVHLZ010000043.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_7742_length_9023_cov_113.830457, whole genome shotgun sequence 9,023
JAVHLZ010000044.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_10478_length_6743_cov_112.461318, whole genome shotgun sequence 6,743
JAVHLZ010000045.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_15686_length_4770_cov_120.357525, whole genome shotgun sequence 4,770
JAVHLZ010000046.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_15913_length_4715_cov_117.332106, whole genome shotgun sequence 4,715
JAVHLZ010000047.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_19876_length_3940_cov_123.142932, whole genome shotgun sequence 3,940
JAVHLZ010000048.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_20501_length_3841_cov_124.188135, whole genome shotgun sequence 3,841
JAVHLZ010000049.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_26200_length_3176_cov_97.637959, whole genome shotgun sequence 3,176
JAVHLZ010000050.1 MAG: Armatimonadota bacterium isolate O5J2P.bin.142 NODE_32157_length_2713_cov_94.948355, whole genome shotgun sequence 2,713

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory