fast.genomicscompare 6,575 genera of bacteria & archaea

 

DSXH01 sp020061355 Ess09-04

Genome identifier: GCA_031082265.1

NCBI assembly name: ASM3108226v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae, DSXH01, DSXH01 sp020061355

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae

Scaffolds: 29

Genes: 3,600 Protein-coding: 3,536 RNAs: 57 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAVHLE010000001.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_1_length_863090_cov_103.009265, whole genome shotgun sequence 863,090
JAVHLE010000002.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_2_length_692485_cov_139.287568, whole genome shotgun sequence 692,485
JAVHLE010000003.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_3_length_521827_cov_105.547172, whole genome shotgun sequence 521,827
JAVHLE010000004.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_4_length_437791_cov_111.877106, whole genome shotgun sequence 437,791
JAVHLE010000005.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_5_length_402003_cov_122.188629, whole genome shotgun sequence 402,003
JAVHLE010000006.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_6_length_335784_cov_123.662487, whole genome shotgun sequence 335,784
JAVHLE010000007.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_7_length_216459_cov_108.883505, whole genome shotgun sequence 216,459
JAVHLE010000008.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_8_length_161221_cov_94.235211, whole genome shotgun sequence 161,221
JAVHLE010000009.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_9_length_152660_cov_132.272665, whole genome shotgun sequence 152,660
JAVHLE010000010.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_10_length_92421_cov_24.511660, whole genome shotgun sequence 92,421
JAVHLE010000011.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_11_length_53463_cov_127.998708, whole genome shotgun sequence 53,463
JAVHLE010000012.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_12_length_44927_cov_24.960020, whole genome shotgun sequence 44,927
JAVHLE010000013.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_13_length_40174_cov_11.918742, whole genome shotgun sequence 40,174
JAVHLE010000014.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_14_length_18874_cov_13.777459, whole genome shotgun sequence 18,874
JAVHLE010000015.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_15_length_8551_cov_121.926083, whole genome shotgun sequence 8,551
JAVHLE010000016.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_16_length_3228_cov_9.965017, whole genome shotgun sequence 3,228
JAVHLE010000017.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_17_length_2007_cov_59.420082, whole genome shotgun sequence 2,007
JAVHLE010000018.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_18_length_1827_cov_224.569977, whole genome shotgun sequence 1,827
JAVHLE010000019.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_19_length_1226_cov_104.016225, whole genome shotgun sequence 1,226
JAVHLE010000020.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_20_length_1223_cov_1.523116, whole genome shotgun sequence 1,223
JAVHLE010000021.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_21_length_1085_cov_49.135922, whole genome shotgun sequence 1,085
JAVHLE010000022.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_22_length_1047_cov_8.060484, whole genome shotgun sequence 1,047
JAVHLE010000023.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_23_length_951_cov_55.950893, whole genome shotgun sequence 951
JAVHLE010000024.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_24_length_787_cov_232.860656, whole genome shotgun sequence 787
JAVHLE010000025.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_25_length_576_cov_3.556622, whole genome shotgun sequence 576
JAVHLE010000026.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_26_length_570_cov_115.834951, whole genome shotgun sequence 570
JAVHLE010000027.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_27_length_569_cov_6.696498, whole genome shotgun sequence 569
JAVHLE010000028.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_28_length_548_cov_1.328600, whole genome shotgun sequence 548
JAVHLE010000029.1 MAG: Melioribacteraceae bacterium isolate Ess09-04 NODE_29_length_518_cov_9.609071, whole genome shotgun sequence 518

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory