fast.genomicscompare 6,575 genera of bacteria & archaea

 

Fimimorpha sp900045905 CHKC1

Genome identifier: GCA_900045905.1

NCBI assembly name: CI1000

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Fimimorpha, Fimimorpha sp900045905

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales

Scaffolds: 48

Genes: 3,138 Protein-coding: 3,081 RNAs: 57 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FCNS01000001.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig1}, whole genome shotgun sequence 432
FCNS01000002.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig2}, whole genome shotgun sequence 377
FCNS01000003.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig3}, whole genome shotgun sequence 76,939
FCNS01000004.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig4}, whole genome shotgun sequence 209,537
FCNS01000005.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig5}, whole genome shotgun sequence 77,060
FCNS01000006.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig6}, whole genome shotgun sequence 954
FCNS01000007.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig7}, whole genome shotgun sequence 86,760
FCNS01000008.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig8}, whole genome shotgun sequence 272,525
FCNS01000009.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig9}, whole genome shotgun sequence 114,089
FCNS01000010.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig10}, whole genome shotgun sequence 49,554
FCNS01000011.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig11}, whole genome shotgun sequence 69,434
FCNS01000012.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig12}, whole genome shotgun sequence 346,860
FCNS01000013.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig13}, whole genome shotgun sequence 60,917
FCNS01000014.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig14}, whole genome shotgun sequence 191,328
FCNS01000015.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig15}, whole genome shotgun sequence 621
FCNS01000016.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig16}, whole genome shotgun sequence 3,973
FCNS01000017.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig17}, whole genome shotgun sequence 825
FCNS01000018.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig18}, whole genome shotgun sequence 4,267
FCNS01000019.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig19}, whole genome shotgun sequence 7,275
FCNS01000020.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig20}, whole genome shotgun sequence 85,308
FCNS01000021.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig21}, whole genome shotgun sequence 505
FCNS01000022.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig22}, whole genome shotgun sequence 70,221
FCNS01000023.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig23}, whole genome shotgun sequence 10,106
FCNS01000024.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig24}, whole genome shotgun sequence 58,023
FCNS01000025.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig25}, whole genome shotgun sequence 43,506
FCNS01000026.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig26}, whole genome shotgun sequence 244
FCNS01000027.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig27}, whole genome shotgun sequence 5,007
FCNS01000028.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig28}, whole genome shotgun sequence 102,514
FCNS01000029.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig29}, whole genome shotgun sequence 6,072
FCNS01000030.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig30}, whole genome shotgun sequence 9,815
FCNS01000031.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig31}, whole genome shotgun sequence 95,600
FCNS01000032.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig32}, whole genome shotgun sequence 22,349
FCNS01000033.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig33}, whole genome shotgun sequence 2,833
FCNS01000034.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig34}, whole genome shotgun sequence 1,222
FCNS01000035.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig35}, whole genome shotgun sequence 98,017
FCNS01000036.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig36}, whole genome shotgun sequence 287,387
FCNS01000037.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig37}, whole genome shotgun sequence 320,850
FCNS01000038.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig38}, whole genome shotgun sequence 270,269
FCNS01000039.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig39}, whole genome shotgun sequence 245
FCNS01000040.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig40}, whole genome shotgun sequence 83,669
FCNS01000041.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig41}, whole genome shotgun sequence 1,472
FCNS01000042.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig42}, whole genome shotgun sequence 499
FCNS01000043.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig43}, whole genome shotgun sequence 255
FCNS01000044.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig44}, whole genome shotgun sequence 64,062
FCNS01000045.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig45}, whole genome shotgun sequence 1,032
FCNS01000046.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig46}, whole genome shotgun sequence 156,350
FCNS01000047.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig47}, whole genome shotgun sequence 520
FCNS01000048.1 Clostridiales bacterium CHKCI001 isolate CHKC1 genome assembly, contig: {contig48}, whole genome shotgun sequence 54,459

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory