fast.genomicscompare 6,575 genera of bacteria & archaea

 

Huintestinicola butyrica 2789STDY5834938

Genome identifier: GCA_900066885.1

NCBI assembly name: 14207_7#61

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Huintestinicola, Huintestinicola butyrica

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus

Scaffolds: 31

Genes: 2,892 Protein-coding: 2,841 RNAs: 51 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FMGN01000001.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000001, whole genome shotgun sequence 468,489
FMGN01000002.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000002, whole genome shotgun sequence 413,985
FMGN01000003.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000003, whole genome shotgun sequence 296,915
FMGN01000004.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000004, whole genome shotgun sequence 251,901
FMGN01000005.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000005, whole genome shotgun sequence 202,132
FMGN01000006.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000006, whole genome shotgun sequence 167,199
FMGN01000007.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000007, whole genome shotgun sequence 151,049
FMGN01000008.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000008, whole genome shotgun sequence 128,693
FMGN01000009.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000009, whole genome shotgun sequence 108,608
FMGN01000010.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000010, whole genome shotgun sequence 102,800
FMGN01000011.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000011, whole genome shotgun sequence 101,682
FMGN01000012.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000012, whole genome shotgun sequence 91,438
FMGN01000013.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000013, whole genome shotgun sequence 86,913
FMGN01000014.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000014, whole genome shotgun sequence 76,876
FMGN01000015.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000015, whole genome shotgun sequence 70,391
FMGN01000016.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000016, whole genome shotgun sequence 55,317
FMGN01000017.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000017, whole genome shotgun sequence 46,695
FMGN01000018.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000018, whole genome shotgun sequence 40,951
FMGN01000019.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000019, whole genome shotgun sequence 36,303
FMGN01000020.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000020, whole genome shotgun sequence 22,157
FMGN01000021.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000021, whole genome shotgun sequence 19,793
FMGN01000022.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000022, whole genome shotgun sequence 16,499
FMGN01000023.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000023, whole genome shotgun sequence 15,297
FMGN01000024.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000024, whole genome shotgun sequence 14,691
FMGN01000025.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000025, whole genome shotgun sequence 11,822
FMGN01000026.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000026, whole genome shotgun sequence 7,845
FMGN01000027.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000027, whole genome shotgun sequence 4,367
FMGN01000028.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000028, whole genome shotgun sequence 1,093
FMGN01000029.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000029, whole genome shotgun sequence 825
FMGN01000030.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000030, whole genome shotgun sequence 699
FMGN01000031.1 uncultured Ruminococcus sp. isolate 2789STDY5834938 genome assembly, contig: SCcontig000031, whole genome shotgun sequence 321

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory