fast.genomicscompare 6,575 genera of bacteria & archaea

 

Weimeria sp900100095 C10

Genome identifier: GCA_900100095.1

NCBI assembly name: IMG-taxon 2593339216 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Weimeria, Weimeria sp900100095

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 70

Genes: 2,740 Protein-coding: 2,661 RNAs: 79 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FMTN01000001.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_NODE_1_len_605_cov_78_755371.66, whole genome shotgun sequence 667
FMTN01000002.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_NODE_2_len_507_cov_72_343193.67, whole genome shotgun sequence 569
FMTN01000003.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_NODE_3_len_1624_cov_61_741997.68, whole genome shotgun sequence 1,686
FMTN01000004.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_NODE_4_len_484_cov_62_694214.69, whole genome shotgun sequence 546
FMTN01000005.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_NODE_5_len_491_cov_49_107944.70, whole genome shotgun sequence 553
FMTN01000006.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00001.1, whole genome shotgun sequence 217,250
FMTN01000007.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00002.2, whole genome shotgun sequence 190,952
FMTN01000008.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00003.3, whole genome shotgun sequence 155,848
FMTN01000009.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00004.4, whole genome shotgun sequence 141,963
FMTN01000010.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00005.5, whole genome shotgun sequence 130,985
FMTN01000011.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00006.6, whole genome shotgun sequence 119,969
FMTN01000012.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00007.7, whole genome shotgun sequence 115,596
FMTN01000013.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00008.8, whole genome shotgun sequence 112,992
FMTN01000014.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00009.9, whole genome shotgun sequence 112,973
FMTN01000015.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00010.10, whole genome shotgun sequence 109,885
FMTN01000016.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00011.11, whole genome shotgun sequence 105,616
FMTN01000017.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00012.12, whole genome shotgun sequence 99,736
FMTN01000018.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00013.13, whole genome shotgun sequence 97,748
FMTN01000019.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00014.14, whole genome shotgun sequence 92,019
FMTN01000020.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00015.15, whole genome shotgun sequence 90,762
FMTN01000021.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00016.16, whole genome shotgun sequence 85,963
FMTN01000022.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00017.17, whole genome shotgun sequence 79,521
FMTN01000023.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00018.18, whole genome shotgun sequence 72,960
FMTN01000024.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00019.19, whole genome shotgun sequence 69,547
FMTN01000025.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00020.20, whole genome shotgun sequence 67,245
FMTN01000026.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00021.21, whole genome shotgun sequence 58,723
FMTN01000027.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00022.22, whole genome shotgun sequence 41,124
FMTN01000028.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00023.23, whole genome shotgun sequence 40,344
FMTN01000029.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00024.24, whole genome shotgun sequence 37,661
FMTN01000030.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00025.25, whole genome shotgun sequence 37,493
FMTN01000031.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00026.26, whole genome shotgun sequence 33,573
FMTN01000032.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00027.27, whole genome shotgun sequence 30,513
FMTN01000033.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00028.28, whole genome shotgun sequence 29,581
FMTN01000034.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00029.29, whole genome shotgun sequence 29,574
FMTN01000035.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00030.30, whole genome shotgun sequence 27,995
FMTN01000036.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00031.31, whole genome shotgun sequence 22,990
FMTN01000037.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00032.32, whole genome shotgun sequence 22,721
FMTN01000038.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00033.33, whole genome shotgun sequence 22,313
FMTN01000039.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00034.34, whole genome shotgun sequence 22,084
FMTN01000040.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00035.35, whole genome shotgun sequence 19,608
FMTN01000041.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00036.36, whole genome shotgun sequence 19,104
FMTN01000042.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00037.37, whole genome shotgun sequence 18,246
FMTN01000043.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00038.38, whole genome shotgun sequence 17,817
FMTN01000044.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00039.39, whole genome shotgun sequence 17,708
FMTN01000045.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00040.40, whole genome shotgun sequence 10,916
FMTN01000046.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00041.41, whole genome shotgun sequence 10,666
FMTN01000047.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00042.42, whole genome shotgun sequence 10,532
FMTN01000048.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00043.43, whole genome shotgun sequence 10,323
FMTN01000049.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00044.44, whole genome shotgun sequence 9,326
FMTN01000050.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00045.45, whole genome shotgun sequence 9,131
FMTN01000051.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00046.46, whole genome shotgun sequence 8,643
FMTN01000052.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00047.47, whole genome shotgun sequence 8,651
FMTN01000053.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00048.48, whole genome shotgun sequence 7,123
FMTN01000054.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00049.49, whole genome shotgun sequence 6,837
FMTN01000055.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00050.50, whole genome shotgun sequence 3,053
FMTN01000056.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00051.51, whole genome shotgun sequence 2,947
FMTN01000057.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00052.52, whole genome shotgun sequence 2,800
FMTN01000058.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00053.53, whole genome shotgun sequence 2,742
FMTN01000059.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00054.54, whole genome shotgun sequence 2,606
FMTN01000060.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00055.55, whole genome shotgun sequence 2,288
FMTN01000061.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00056.56, whole genome shotgun sequence 1,864
FMTN01000062.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00057.57, whole genome shotgun sequence 1,786
FMTN01000063.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00058.58, whole genome shotgun sequence 1,642
FMTN01000064.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00059.59, whole genome shotgun sequence 1,626
FMTN01000065.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00060.60, whole genome shotgun sequence 1,561
FMTN01000066.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00061.61, whole genome shotgun sequence 1,532
FMTN01000067.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00062.62, whole genome shotgun sequence 1,252
FMTN01000068.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00063.63, whole genome shotgun sequence 1,182
FMTN01000069.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00064.64, whole genome shotgun sequence 1,180
FMTN01000070.1 Lachnospiraceae bacterium C10 genome assembly, contig: IE06DRAFT_scaffold00065.65, whole genome shotgun sequence 1,110

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory