fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA3766 sp900100245 G41

Genome identifier: GCA_900100245.1

NCBI assembly name: IMG-taxon 2606217752 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, UBA3766, UBA3766 sp900100245

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 22

Genes: 2,433 Protein-coding: 2,371 RNAs: 62 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FNEU01000001.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_101, whole genome shotgun sequence 546,736
FNEU01000002.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_102, whole genome shotgun sequence 264,613
FNEU01000003.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_103, whole genome shotgun sequence 212,228
FNEU01000004.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_104, whole genome shotgun sequence 206,080
FNEU01000005.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_105, whole genome shotgun sequence 185,892
FNEU01000006.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_106, whole genome shotgun sequence 184,942
FNEU01000007.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_107, whole genome shotgun sequence 158,757
FNEU01000008.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_108, whole genome shotgun sequence 149,481
FNEU01000009.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_109, whole genome shotgun sequence 135,374
FNEU01000010.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_110, whole genome shotgun sequence 132,426
FNEU01000011.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_111, whole genome shotgun sequence 81,257
FNEU01000012.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_112, whole genome shotgun sequence 79,143
FNEU01000013.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_113, whole genome shotgun sequence 71,495
FNEU01000014.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_114, whole genome shotgun sequence 53,189
FNEU01000015.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_115, whole genome shotgun sequence 40,355
FNEU01000016.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_116, whole genome shotgun sequence 31,570
FNEU01000017.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_117, whole genome shotgun sequence 19,615
FNEU01000018.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_118, whole genome shotgun sequence 16,085
FNEU01000019.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_119, whole genome shotgun sequence 10,833
FNEU01000020.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_120, whole genome shotgun sequence 7,937
FNEU01000021.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_121, whole genome shotgun sequence 2,749
FNEU01000022.1 Lachnospiraceae bacterium G41 genome assembly, contig: Ga0007617_122, whole genome shotgun sequence 1,634

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory