fast.genomicscompare 6,575 genera of bacteria & archaea

 

NK4A136 sp900102065 XPB1003

Genome identifier: GCA_900102065.1

NCBI assembly name: IMG-taxon 2593339154 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, NK4A136, NK4A136 sp900102065

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 42

Genes: 2,892 Protein-coding: 2,827 RNAs: 65 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FMVK01000001.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00001.1, whole genome shotgun sequence 500,839
FMVK01000002.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00002.2, whole genome shotgun sequence 431,788
FMVK01000003.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00003.3, whole genome shotgun sequence 341,840
FMVK01000004.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00004.4, whole genome shotgun sequence 231,015
FMVK01000005.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00005.5, whole genome shotgun sequence 165,135
FMVK01000006.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00006.6, whole genome shotgun sequence 142,878
FMVK01000007.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00007.7, whole genome shotgun sequence 135,694
FMVK01000008.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00008.8, whole genome shotgun sequence 134,922
FMVK01000009.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00009.9, whole genome shotgun sequence 126,923
FMVK01000010.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00010.10, whole genome shotgun sequence 126,057
FMVK01000011.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00011.11, whole genome shotgun sequence 112,836
FMVK01000012.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00012.12, whole genome shotgun sequence 102,190
FMVK01000013.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00013.13, whole genome shotgun sequence 98,425
FMVK01000014.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00014.14, whole genome shotgun sequence 94,594
FMVK01000015.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00015.15, whole genome shotgun sequence 89,446
FMVK01000016.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00016.16, whole genome shotgun sequence 72,554
FMVK01000017.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00017.17, whole genome shotgun sequence 65,023
FMVK01000018.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00018.18, whole genome shotgun sequence 44,318
FMVK01000019.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00019.19, whole genome shotgun sequence 31,083
FMVK01000020.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00020.20, whole genome shotgun sequence 30,180
FMVK01000021.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00021.21, whole genome shotgun sequence 16,117
FMVK01000022.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00022.22, whole genome shotgun sequence 6,119
FMVK01000023.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00023.23, whole genome shotgun sequence 5,704
FMVK01000024.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00024.24, whole genome shotgun sequence 5,511
FMVK01000025.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00025.25, whole genome shotgun sequence 3,706
FMVK01000026.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00026.26, whole genome shotgun sequence 3,417
FMVK01000027.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00027.27, whole genome shotgun sequence 3,245
FMVK01000028.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00028.28, whole genome shotgun sequence 2,850
FMVK01000029.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00029.29, whole genome shotgun sequence 1,928
FMVK01000030.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00030.30, whole genome shotgun sequence 1,860
FMVK01000031.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00031.31, whole genome shotgun sequence 1,825
FMVK01000032.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00032.32, whole genome shotgun sequence 1,668
FMVK01000033.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00033.33, whole genome shotgun sequence 1,648
FMVK01000034.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00034.34, whole genome shotgun sequence 1,640
FMVK01000035.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00035.35, whole genome shotgun sequence 1,570
FMVK01000036.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00036.36, whole genome shotgun sequence 1,476
FMVK01000037.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00037.37, whole genome shotgun sequence 1,424
FMVK01000038.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00038.38, whole genome shotgun sequence 1,311
FMVK01000039.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00039.39, whole genome shotgun sequence 1,299
FMVK01000040.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00040.40, whole genome shotgun sequence 1,243
FMVK01000041.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00041.41, whole genome shotgun sequence 1,195
FMVK01000042.1 Lachnospiraceae bacterium XPB1003 genome assembly, contig: IE11DRAFT_scaffold00042.42, whole genome shotgun sequence 1,048

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory