fast.genomicscompare 6,575 genera of bacteria & archaea

 

XBB2008 sp900102235 XBB2008

Genome identifier: GCA_900102235.1

NCBI assembly name: IMG-taxon 2593339165 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, XBB2008, XBB2008 sp900102235

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 24

Genes: 3,134 Protein-coding: 3,050 RNAs: 84 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FMVL01000001.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_NODE_1_len_1295_cov_63_233978.23, whole genome shotgun sequence 1,357
FMVL01000002.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_NODE_3_len_968_cov_41_601238.24, whole genome shotgun sequence 1,030
FMVL01000003.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00001.1, whole genome shotgun sequence 691,497
FMVL01000004.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00002.2, whole genome shotgun sequence 508,821
FMVL01000005.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00003.3, whole genome shotgun sequence 485,689
FMVL01000006.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00004.4, whole genome shotgun sequence 404,439
FMVL01000007.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00005.5, whole genome shotgun sequence 324,390
FMVL01000008.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00006.6, whole genome shotgun sequence 238,328
FMVL01000009.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00007.7, whole genome shotgun sequence 168,465
FMVL01000010.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00008.8, whole genome shotgun sequence 167,670
FMVL01000011.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00009.9, whole genome shotgun sequence 103,268
FMVL01000012.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00010.10, whole genome shotgun sequence 99,759
FMVL01000013.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00011.11, whole genome shotgun sequence 89,063
FMVL01000014.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00012.12, whole genome shotgun sequence 80,013
FMVL01000015.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00013.13, whole genome shotgun sequence 66,766
FMVL01000016.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00014.14, whole genome shotgun sequence 32,753
FMVL01000017.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00015.15, whole genome shotgun sequence 21,523
FMVL01000018.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00016.16, whole genome shotgun sequence 18,870
FMVL01000019.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00017.17, whole genome shotgun sequence 7,701
FMVL01000020.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00018.18, whole genome shotgun sequence 2,918
FMVL01000021.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00019.19, whole genome shotgun sequence 2,500
FMVL01000022.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00020.20, whole genome shotgun sequence 1,631
FMVL01000023.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00021.21, whole genome shotgun sequence 1,361
FMVL01000024.1 Lachnospiraceae bacterium XBB2008 genome assembly, contig: IE12DRAFT_scaffold00022.22, whole genome shotgun sequence 1,215

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory