fast.genomicscompare 6,575 genera of bacteria & archaea

 

FD2005 sp000702525 A10

Genome identifier: GCA_900109005.1

NCBI assembly name: IMG-taxon 2617270830 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, FD2005, FD2005 sp000702525

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 13

Genes: 2,340 Protein-coding: 2,247 RNAs: 64 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FNYN01000001.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_101, whole genome shotgun sequence 474,504
FNYN01000002.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_102, whole genome shotgun sequence 472,459
FNYN01000003.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_103, whole genome shotgun sequence 469,605
FNYN01000004.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_104, whole genome shotgun sequence 349,800
FNYN01000005.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_105, whole genome shotgun sequence 349,359
FNYN01000006.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_106, whole genome shotgun sequence 219,379
FNYN01000007.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_107, whole genome shotgun sequence 118,729
FNYN01000008.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_108, whole genome shotgun sequence 48,045
FNYN01000009.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_109, whole genome shotgun sequence 4,363
FNYN01000010.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_110, whole genome shotgun sequence 1,587
FNYN01000011.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_111, whole genome shotgun sequence 1,329
FNYN01000012.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_112, whole genome shotgun sequence 1,260
FNYN01000013.1 Lachnospiraceae bacterium A10 genome assembly, contig: Ga0072937_113, whole genome shotgun sequence 1,160

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory