fast.genomicscompare 6,575 genera of bacteria & archaea

 

XBB1006 sp900115795 XBB1006

Genome identifier: GCA_900115795.1

NCBI assembly name: IMG-taxon 2593339157 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, XBB1006, XBB1006 sp900115795

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 40

Genes: 2,637 Protein-coding: 2,570 RNAs: 67 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
FOXT01000001.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_NODE_1_len_977_cov_62_122826.38, whole genome shotgun sequence 1,039
FOXT01000002.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_NODE_2_len_364_cov_83_681320.39, whole genome shotgun sequence 426
FOXT01000003.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_NODE_3_len_1563_cov_65_750481.40, whole genome shotgun sequence 1,625
FOXT01000004.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00001.1, whole genome shotgun sequence 433,904
FOXT01000005.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00002.2, whole genome shotgun sequence 366,844
FOXT01000006.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00003.3, whole genome shotgun sequence 268,190
FOXT01000007.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00004.4, whole genome shotgun sequence 222,765
FOXT01000008.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00005.5, whole genome shotgun sequence 181,590
FOXT01000009.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00006.6, whole genome shotgun sequence 147,043
FOXT01000010.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00007.7, whole genome shotgun sequence 139,257
FOXT01000011.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00008.8, whole genome shotgun sequence 126,175
FOXT01000012.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00009.9, whole genome shotgun sequence 107,572
FOXT01000013.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00010.10, whole genome shotgun sequence 102,784
FOXT01000014.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00011.11, whole genome shotgun sequence 96,992
FOXT01000015.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00012.12, whole genome shotgun sequence 86,173
FOXT01000016.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00013.13, whole genome shotgun sequence 82,934
FOXT01000017.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00014.14, whole genome shotgun sequence 82,394
FOXT01000018.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00015.15, whole genome shotgun sequence 43,320
FOXT01000019.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00016.16, whole genome shotgun sequence 42,100
FOXT01000020.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00017.17, whole genome shotgun sequence 24,617
FOXT01000021.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00018.18, whole genome shotgun sequence 24,036
FOXT01000022.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00019.19, whole genome shotgun sequence 21,729
FOXT01000023.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00020.20, whole genome shotgun sequence 21,028
FOXT01000024.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00021.21, whole genome shotgun sequence 19,112
FOXT01000025.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00022.22, whole genome shotgun sequence 15,972
FOXT01000026.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00023.23, whole genome shotgun sequence 8,735
FOXT01000027.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00024.24, whole genome shotgun sequence 8,581
FOXT01000028.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00025.25, whole genome shotgun sequence 5,630
FOXT01000029.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00026.26, whole genome shotgun sequence 5,552
FOXT01000030.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00027.27, whole genome shotgun sequence 4,922
FOXT01000031.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00028.28, whole genome shotgun sequence 4,405
FOXT01000032.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00029.29, whole genome shotgun sequence 3,635
FOXT01000033.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00030.30, whole genome shotgun sequence 3,635
FOXT01000034.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00031.31, whole genome shotgun sequence 3,464
FOXT01000035.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00032.32, whole genome shotgun sequence 3,188
FOXT01000036.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00033.33, whole genome shotgun sequence 2,630
FOXT01000037.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00034.34, whole genome shotgun sequence 2,541
FOXT01000038.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00035.35, whole genome shotgun sequence 1,988
FOXT01000039.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00036.36, whole genome shotgun sequence 1,803
FOXT01000040.1 Lachnospiraceae bacterium XBB1006 genome assembly, contig: IE13DRAFT_scaffold00037.37, whole genome shotgun sequence 1,654

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory