fast.genomicscompare 6,575 genera of bacteria & archaea

 

UPXZ01 sp900498215 IK1

Genome identifier: GCA_900498215.1

NCBI assembly name: TRIP_d_PRJEB27924

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Paludibacteraceae, UPXZ01, UPXZ01 sp900498215

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Paludibacteraceae, Paludibacter

Scaffolds: 1

Genes: 2,665 Protein-coding: 2,592 RNAs: 64 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
LR026962.1 uncultured Paludibacter sp. isolate IK1 genome assembly, chromosome: TRIP_d, whole genome shotgun sequence 3,156,633

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory