fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thalassocella blandensis ISS155

Genome identifier: GCA_902141825.1

NCBI assembly name: CECT 9533

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, Thalassocella, Thalassocella blandensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Thalassocella, Thalassocella blandensis

Scaffolds: 49

Genes: 4,824 Protein-coding: 4,759 RNAs: 65 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CABFPG010000001.1 Teredinibacter sp. ISS155 genome assembly, contig: 0001, whole genome shotgun sequence 954,206
CABFPG010000002.1 Teredinibacter sp. ISS155 genome assembly, contig: 0002, whole genome shotgun sequence 801,809
CABFPG010000003.1 Teredinibacter sp. ISS155 genome assembly, contig: 0003, whole genome shotgun sequence 751,405
CABFPG010000004.1 Teredinibacter sp. ISS155 genome assembly, contig: 0004, whole genome shotgun sequence 590,828
CABFPG010000005.1 Teredinibacter sp. ISS155 genome assembly, contig: 0005, whole genome shotgun sequence 512,541
CABFPG010000006.1 Teredinibacter sp. ISS155 genome assembly, contig: 0006, whole genome shotgun sequence 429,254
CABFPG010000007.1 Teredinibacter sp. ISS155 genome assembly, contig: 0007, whole genome shotgun sequence 381,709
CABFPG010000008.1 Teredinibacter sp. ISS155 genome assembly, contig: 0008, whole genome shotgun sequence 275,287
CABFPG010000009.1 Teredinibacter sp. ISS155 genome assembly, contig: 0009, whole genome shotgun sequence 262,903
CABFPG010000010.1 Teredinibacter sp. ISS155 genome assembly, contig: 0010, whole genome shotgun sequence 229,377
CABFPG010000011.1 Teredinibacter sp. ISS155 genome assembly, contig: 0011, whole genome shotgun sequence 209,694
CABFPG010000012.1 Teredinibacter sp. ISS155 genome assembly, contig: 0012, whole genome shotgun sequence 179,521
CABFPG010000013.1 Teredinibacter sp. ISS155 genome assembly, contig: 0013, whole genome shotgun sequence 173,795
CABFPG010000014.1 Teredinibacter sp. ISS155 genome assembly, contig: 0014, whole genome shotgun sequence 133,542
CABFPG010000015.1 Teredinibacter sp. ISS155 genome assembly, contig: 0015, whole genome shotgun sequence 84,404
CABFPG010000016.1 Teredinibacter sp. ISS155 genome assembly, contig: 0016, whole genome shotgun sequence 33,035
CABFPG010000017.1 Teredinibacter sp. ISS155 genome assembly, contig: 0017, whole genome shotgun sequence 12,384
CABFPG010000018.1 Teredinibacter sp. ISS155 genome assembly, contig: 0018, whole genome shotgun sequence 8,256
CABFPG010000019.1 Teredinibacter sp. ISS155 genome assembly, contig: 0019, whole genome shotgun sequence 7,271
CABFPG010000020.1 Teredinibacter sp. ISS155 genome assembly, contig: 0020, whole genome shotgun sequence 6,006
CABFPG010000021.1 Teredinibacter sp. ISS155 genome assembly, contig: 0021, whole genome shotgun sequence 3,694
CABFPG010000022.1 Teredinibacter sp. ISS155 genome assembly, contig: 0022, whole genome shotgun sequence 3,467
CABFPG010000023.1 Teredinibacter sp. ISS155 genome assembly, contig: 0023, whole genome shotgun sequence 3,274
CABFPG010000024.1 Teredinibacter sp. ISS155 genome assembly, contig: 0024, whole genome shotgun sequence 3,141
CABFPG010000025.1 Teredinibacter sp. ISS155 genome assembly, contig: 0025, whole genome shotgun sequence 2,971
CABFPG010000026.1 Teredinibacter sp. ISS155 genome assembly, contig: 0026, whole genome shotgun sequence 2,646
CABFPG010000027.1 Teredinibacter sp. ISS155 genome assembly, contig: 0027, whole genome shotgun sequence 2,171
CABFPG010000028.1 Teredinibacter sp. ISS155 genome assembly, contig: 0028, whole genome shotgun sequence 2,149
CABFPG010000029.1 Teredinibacter sp. ISS155 genome assembly, contig: 0029, whole genome shotgun sequence 1,910
CABFPG010000030.1 Teredinibacter sp. ISS155 genome assembly, contig: 0030, whole genome shotgun sequence 1,907
CABFPG010000031.1 Teredinibacter sp. ISS155 genome assembly, contig: 0031, whole genome shotgun sequence 1,871
CABFPG010000032.1 Teredinibacter sp. ISS155 genome assembly, contig: 0032, whole genome shotgun sequence 1,836
CABFPG010000033.1 Teredinibacter sp. ISS155 genome assembly, contig: 0033, whole genome shotgun sequence 1,424
CABFPG010000034.1 Teredinibacter sp. ISS155 genome assembly, contig: 0034, whole genome shotgun sequence 1,356
CABFPG010000035.1 Teredinibacter sp. ISS155 genome assembly, contig: 0035, whole genome shotgun sequence 1,339
CABFPG010000036.1 Teredinibacter sp. ISS155 genome assembly, contig: 0036, whole genome shotgun sequence 1,295
CABFPG010000037.1 Teredinibacter sp. ISS155 genome assembly, contig: 0037, whole genome shotgun sequence 1,268
CABFPG010000038.1 Teredinibacter sp. ISS155 genome assembly, contig: 0038, whole genome shotgun sequence 1,177
CABFPG010000039.1 Teredinibacter sp. ISS155 genome assembly, contig: 0039, whole genome shotgun sequence 1,144
CABFPG010000040.1 Teredinibacter sp. ISS155 genome assembly, contig: 0040, whole genome shotgun sequence 872
CABFPG010000041.1 Teredinibacter sp. ISS155 genome assembly, contig: 0041, whole genome shotgun sequence 1,063
CABFPG010000042.1 Teredinibacter sp. ISS155 genome assembly, contig: 0042, whole genome shotgun sequence 1,028
CABFPG010000043.1 Teredinibacter sp. ISS155 genome assembly, contig: 0043, whole genome shotgun sequence 935
CABFPG010000044.1 Teredinibacter sp. ISS155 genome assembly, contig: 0044, whole genome shotgun sequence 756
CABFPG010000045.1 Teredinibacter sp. ISS155 genome assembly, contig: 0045, whole genome shotgun sequence 742
CABFPG010000046.1 Teredinibacter sp. ISS155 genome assembly, contig: 0046, whole genome shotgun sequence 738
CABFPG010000047.1 Teredinibacter sp. ISS155 genome assembly, contig: 0047, whole genome shotgun sequence 691
CABFPG010000048.1 Teredinibacter sp. ISS155 genome assembly, contig: 0048, whole genome shotgun sequence 644
CABFPG010000049.1 Teredinibacter sp. ISS155 genome assembly, contig: 0049, whole genome shotgun sequence 600

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory