fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAKMZU01 sp902705835 BC9_1

Genome identifier: GCA_902705835.1

NCBI assembly name: ASM90270583v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, DT-91, CAKMZU01, CAKMZU01 sp902705835

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Spongiibacteraceae

Scaffolds: 30

Genes: 4,336 Protein-coding: 4,275 RNAs: 61 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CACSIN010000001.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_1, whole genome shotgun sequence 1,002,582
CACSIN010000002.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_10, whole genome shotgun sequence 217,115
CACSIN010000003.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_11, whole genome shotgun sequence 215,943
CACSIN010000004.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_12, whole genome shotgun sequence 187,014
CACSIN010000005.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_13, whole genome shotgun sequence 159,231
CACSIN010000006.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_14, whole genome shotgun sequence 152,020
CACSIN010000007.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_15, whole genome shotgun sequence 129,541
CACSIN010000008.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_16, whole genome shotgun sequence 102,253
CACSIN010000009.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_17, whole genome shotgun sequence 84,556
CACSIN010000010.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_18, whole genome shotgun sequence 69,880
CACSIN010000011.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_19, whole genome shotgun sequence 62,734
CACSIN010000012.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_2, whole genome shotgun sequence 413,181
CACSIN010000013.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_20, whole genome shotgun sequence 50,422
CACSIN010000014.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_21, whole genome shotgun sequence 44,935
CACSIN010000015.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_22, whole genome shotgun sequence 42,744
CACSIN010000016.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_23, whole genome shotgun sequence 41,367
CACSIN010000017.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_24, whole genome shotgun sequence 35,100
CACSIN010000018.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_25, whole genome shotgun sequence 24,220
CACSIN010000019.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_26, whole genome shotgun sequence 15,267
CACSIN010000020.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_27, whole genome shotgun sequence 11,343
CACSIN010000021.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_28, whole genome shotgun sequence 10,069
CACSIN010000022.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_29, whole genome shotgun sequence 7,487
CACSIN010000023.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_3, whole genome shotgun sequence 385,968
CACSIN010000024.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_30, whole genome shotgun sequence 7,150
CACSIN010000025.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_4, whole genome shotgun sequence 385,380
CACSIN010000026.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_5, whole genome shotgun sequence 274,944
CACSIN010000027.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_6, whole genome shotgun sequence 255,561
CACSIN010000028.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_7, whole genome shotgun sequence 230,446
CACSIN010000029.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_8, whole genome shotgun sequence 224,691
CACSIN010000030.1 BD1-7 clade bacterium isolate BC9_1 genome assembly, contig: BC9_1_contig_9, whole genome shotgun sequence 221,117

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory